exclude_irrelevant_findings: Sample inclusion, exclusion and blacklist sets for a MiADE...

In anoopshah/Rdiagnosislist: Manipulate SNOMED CT Diagnosis Lists

Sample inclusion, exclusion and blacklist sets for a MiADE CDB

Description

Returns a set of SNOMED concepts (as a SNOMEDconcept vector) which can be used to exclude findings in the MedCAT named entity recognition step, or blacklist (filter out) findings from the final output.

Usage

exclude_irrelevant_findings(SNOMED = getSNOMED())

blacklist_vague_findings(SNOMED = getSNOMED())

blacklist_almost_all_except_diseases(SNOMED = getSNOMED())

Arguments

SNOMED

environment containing a SNOMED dictionary

Details

• exclude_irrelevant_findingssocial history (except housing problems and care needs), administrative statuses (except registered disabled) and for concept detection

• blacklist_vague_findingsvague findings and disorders, intended to be used in the blacklist

• blacklist_almost_all_except_diseasesalmost all findings and vague disorders, intended to be used in the blacklist

Value

SNOMEDconcept vector containing findings to exclude

anoopshah/Rdiagnosislist documentation built on Oct. 18, 2024, 9:48 a.m.