exclude_irrelevant_findings: Sample inclusion, exclusion and blacklist sets for a MiADE...

In anoopshah/Rdiagnosislist: Manipulate SNOMED CT Diagnosis Lists

Sample inclusion, exclusion and blacklist sets for a MiADE CDB

Description

Returns a set of SNOMED concepts (as a SNOMEDconcept vector) which can be used to exclude findings in the MedCAT named entity recognition step, or blacklist (filter out) findings from the final output.

Usage

exclude_irrelevant_findings(SNOMED = getSNOMED())

blacklist_vague_findings(SNOMED = getSNOMED())

blacklist_almost_all_except_diseases(SNOMED = getSNOMED())

Arguments

SNOMED

environment containing a SNOMED dictionary

Details

exclude_irrelevant_findings

social history (except housing problems and care needs), administrative statuses (except registered disabled) and for concept detection

blacklist_vague_findings

vague findings and disorders, intended to be used in the blacklist

blacklist_almost_all_except_diseases

almost all findings and vague disorders, intended to be used in the blacklist

Value

SNOMEDconcept vector containing findings to exclude

See Also

exportMiADECDB, createCDB

Other MiADE functions: exportMiADECDB()

Other MiADE functions: exportMiADECDB()

Other MiADE functions: exportMiADECDB()

anoopshah/Rdiagnosislist documentation built on March 29, 2025, 10:46 a.m.