plot_dynamic_HR: Plots the dynamic hazard ratio of a cox or CSC supermodel

In anyafries/dynLM: Dynamic w-year risk predictions from landmark time points

Plots the dynamic hazard ratio of a cox or CSC supermodel

Description

Plots the dynamic hazard ratio of a cox or CSC supermodel

Usage

plot_dynamic_HR(
  supermodel,
  covars,
  CI = T,
  cause,
  end_time,
  extend = F,
  silence = F,
  xlab = "LM time",
  ylab,
  ylim,
  main,
  logHR = T,
  ...
)

Arguments

supermodel	An object of class "LMcoxph" or "LMCSC", i.e. a fitted supermodel
covars	Vector or list of strings indicating the variables to plot the HR of (note these must be given without time interaction label, for e.g., as in LMcovars).
CI	Include confidence intervals or not, default is TRUE
cause	Cause of interest if considering competing risks
end_time	Final time point to plot HR, defaults to the last landmark point used in model fitting.
extend	Argument to allow for HR to be plot at landmark times that are later than the LMs used in model fitting. Default is FALSE. If set to TRUE, the HR may be unreliable.
silence	silence the warning message when end_time > LMs used in fitting the model
xlab	x label for the plots
ylab	y label for the plots
ylim	y limit for the plots
main	Vector of strings indicating the title of each plot. Must be in the same order as covars.
logHR	Boolean, if true plots the log of the hazard ratio, if false plots the hazard ratio
...	Additional arguments passed to plot

Details

See the Github for example code

Value

Plots for each variable in covars showing the dynamic hazard ratio

anyafries/dynLM documentation built on July 26, 2022, 12:17 a.m.