plot_dynamic_HR: Plots the dynamic hazard ratio of a cox or CSC supermodel

View source: R/plot_dynamic_HR.R

plot_dynamic_HRR Documentation

Plots the dynamic hazard ratio of a cox or CSC supermodel

Description

Plots the dynamic hazard ratio of a cox or CSC supermodel

Usage

plot_dynamic_HR(
  supermodel,
  covars,
  CI = T,
  cause,
  end_time,
  extend = F,
  silence = F,
  xlab = "LM time",
  ylab,
  ylim,
  main,
  logHR = T,
  ...
)

Arguments

supermodel

An object of class "LMcoxph" or "LMCSC", i.e. a fitted supermodel

covars

Vector or list of strings indicating the variables to plot the HR of (note these must be given without time interaction label, for e.g., as in LMcovars).

CI

Include confidence intervals or not, default is TRUE

cause

Cause of interest if considering competing risks

end_time

Final time point to plot HR, defaults to the last landmark point used in model fitting.

extend

Argument to allow for HR to be plot at landmark times that are later than the LMs used in model fitting. Default is FALSE. If set to TRUE, the HR may be unreliable.

silence

silence the warning message when end_time > LMs used in fitting the model

xlab

x label for the plots

ylab

y label for the plots

ylim

y limit for the plots

main

Vector of strings indicating the title of each plot. Must be in the same order as covars.

logHR

Boolean, if true plots the log of the hazard ratio, if false plots the hazard ratio

...

Additional arguments passed to plot

Details

See the Github for example code

Value

Plots for each variable in covars showing the dynamic hazard ratio


anyafries/dynLM documentation built on July 26, 2022, 12:17 a.m.