run_models: Run models

In aornugent/competition:

Description

Models are coded in Stan and can be found in the /models subdirectory. Model output is saved to .Rdata files for later inspection. These are are not distributed due to their size. Previously saved analysis can be inspected using check_models() or loaded with load_models().

Usage

run_model(model = "m1")

Arguments

n_sp	Treat residents as separate species (n=6), or single community (n=4).
ts	Number of timesteps for iteration method.
path	Directory to save model outputs, defaults to /models.
check	auto-run model checks, boolean (default = T).
model	one of c("BV", "GL")

Details

Models include:

1. BV: Beverton-Holt biomass model

aornugent/competition documentation built on Oct. 3, 2019, 6:33 p.m.