read_ucsc_cytobandideo: Read and format a cytoBandIdeo file retrieved from the UCSC...

Description Usage Arguments Author(s)

View source: R/read_ucsc_cytobandideo.R

Description

Generates a formatted a list containing several chromosomal and genomic informations (like, number of chromosomes, genome lengths, centromere positions) that are helpful to manipulate and plot genomic data.

Usage

1
read_ucsc_cytobandideo(file = "cytoBandIdeo.hg19", genomebuild = "hg19", species = "homo_sapiens")

Arguments

file

A name (and path) of a cytoBandIdeo file from the UCSC Genome Browser (Table Browser).

genomebuild

A genome build ID that will be stored in the output object.

species

A species name that will be stored in the output object.

Author(s)

Bastien Job


aoumess/chromosomes documentation built on Dec. 19, 2021, 3:41 a.m.