calc.lammax: Calculates maximum lambda value

Description Usage Arguments Value

Description

Calculates maximum lambda value as smallest lambda for which all coefficients are zero.

Usage

1
calc.lammax(Z, y, n, p, H, mu, theta, groups, thresh, erel, maxit)

Arguments

Z

Matrix of log OTU proportions

y

Outcome vector

n

Number of subjects

p

Number of OTUs

H

Matrix I_p - (1/p) 1_p 1_p'

mu

Augmented Lagrangian parameter

theta

Defines convex combination between L1 and L2 penalties (theta = 1 is L1 only, theta = 0 is L2 only)

groups

Vector indicating group membership of each OTU

thresh

Threshold for convergence

erel

Internal parameter for ADMM convergence

maxit

Maximum number of iterations

Value

Maximum lambda value


aplantin/CSGL documentation built on May 21, 2019, 12:08 p.m.