findMaxLams: findMaxLams
In aplantin/MCL: Fits multilevel compositional lasso
Description
Finds maximum lambda value (smallest lambda such
that all coefficients are zero) for both lam1 and lam2
Usage
1
findMaxLams(Z, W, y, facZ, facW, groups, groupIdx, mu, maxit, thresh)
Arguments
Z
OTU matrix (group level)
W
OTU matrix (within-group level)
y
Vector of outcomes
facZ
Scaling factors for Z
facW
Scaling factors for W
groups
Vector indicating group membership for each feature
groupIdx
List indicating feature indices in each group
mu
Lagrange scaling parameter
maxit
Maximum number of iterations allowed
thresh
Parameter defining convergence
aplantin/MCL documentation built on May 25, 2019, 2:26 p.m.
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Description
Finds maximum lambda value (smallest lambda such that all coefficients are zero) for both lam1 and lam2
Usage
1 | findMaxLams(Z, W, y, facZ, facW, groups, groupIdx, mu, maxit, thresh)
|
Arguments
Z |
OTU matrix (group level) |
W |
OTU matrix (within-group level) |
y |
Vector of outcomes |
facZ |
Scaling factors for Z |
facW |
Scaling factors for W |
groups |
Vector indicating group membership for each feature |
groupIdx |
List indicating feature indices in each group |
mu |
Lagrange scaling parameter |
maxit |
Maximum number of iterations allowed |
thresh |
Parameter defining convergence |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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