aplantin/MiRKATS: Microbiome Regression-based Kernal Association Test for Survival (MiRKAT-S)

Community level test for association between microbiome composition and survival outcomes via user-defined kernel or distance matrices. Recommended distances include the UniFrac and generalized UniFrac distances and the Bray-Curtis dissimilarity metric.

Getting started

Package details

AuthorAnna Plantinga <[email protected]>, Michael Wu <[email protected]>
MaintainerAnna Plantinga <[email protected]>
LicenseGPL (>= 2)
Version1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("aplantin/MiRKATS")
aplantin/MiRKATS documentation built on June 8, 2018, 9:24 p.m.