Files in arlston/MeTDiff
Differential analysis for MeRIP-seq data
DESCRIPTION
NAMESPACE
NEWS
R/MeTDiff.R
R/bed2transcriptdb.R
R/betabinomial.hmm.R
R/betabinomial.lh.R
R/betabinomial.vit.R
R/diff.call.module.R
R/divide.anno.into.batches.R
R/get.bam.chrs.R
R/get.bam.read.length.R
R/get.block.from.rna.peak.R
R/get.check.points.R
R/get.check.points.reads.count.R
R/get.gene.anno.R
R/get.peak.from.loci.R
R/get.peak.reads.count.R
R/get.reads.count.R
R/get.sample.id.R
R/get.table.peak.result.R
R/help.derivative.R
R/help.factorial.R
R/help.initial.R
R/help.minorm.R
R/help.postprob.R
R/metpeak.process.R
R/peak.call.module.R
R/read.gtf.R
R/remove.local.anomalities.R
R/report.diff.peak.based.on.result.R
inst/extdata/IP1.bam
inst/extdata/IP1.bam.bai
inst/extdata/IP2.bam
inst/extdata/IP2.bam.bai
inst/extdata/IP3.bam
inst/extdata/IP3.bam.bai
inst/extdata/Input1.bam
inst/extdata/Input1.bam.bai
inst/extdata/Input2.bam
inst/extdata/Input2.bam.bai
inst/extdata/Input3.bam
inst/extdata/Input3.bam.bai
inst/extdata/example.gtf
inst/extdata/treated_IP1.bam
inst/extdata/treated_IP1.bam.bai
inst/extdata/treated_Input1.bam
inst/extdata/treated_Input1.bam.bai
man/MeTDiff-package.Rd
man/MeTDiff.Rd
