Files in armbrustlab/ssPopModel
ssPopModel: a size-structured matrix population model implemented in R
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/functions_model.R
R/size_distribution.R
README.md
inst/PRO_data/README.ipynb
inst/PRO_data/SeaFlow_PSD_hourlyCOUNT_v4.csv
inst/PRO_data/SeaFlow_PSD_hourlyCOUNT_v4_regrid-25-8_day2to5_1080min-offset.nc
inst/PRO_data/SeaFlow_SizeDist.csv
inst/SYN_data/day733320data.mat
inst/SYN_data/results.mat
inst/ssMatrixModel_Pro_Day1-4.ipynb
inst/ssMatrixModel_optim_Pro+resp+smooth+delta.ipynb
inst/ssMatrixModel_optim_Pro+resp+smooth.ipynb
inst/ssMatrixModel_optim_Pro+resp.ipynb
inst/ssMatrixModel_optim_Pro.ipynb
inst/ssMatrixModel_optim_Syn+resp.ipynb
inst/ssMatrixModel_optim_Syn.ipynb
make_docs.R
man/create_PSD.Rd
man/delta.Rd
man/determine_opt_para.Rd
man/gamma_t.Rd
man/matrix_conct_fast.Rd
man/plot_PSD.Rd
man/rho_t.Rd
man/sigma_hl.Rd
man/sigma_lsq.Rd
man/transform_PSD.Rd
run_ssMatrixModel.ipynb
