| area_shpere | Calculates the surface area of segments of spheres of radius... |
| ARschool_manipulate | Generates and writes to file, fish positions which are AR(1)... |
| ARsim_school | Generates and writes to file, fish positions which are AR(1)... |
| beamPattern.TSD | Returns a function for the beam pattern of an acoustic... |
| circularPiston_appr | Function used for approximating the beam pattern of the beam... |
| circularPiston_ellipticRadius_sidelobefit.TSD | Returns the theoretical far field approximation of the... |
| circularPiston_ellipticRadius.TSD | Returns the theoretical far field approximation of the... |
| circularPiston.TSD | Returns the theoretical far field approximation of the... |
| coltrace | Draws a color spectrum on which the user can assign points... |
| cor2overlap | Transforms from correlation values to overlap values used in... |
| createEvent | Creates event skeleton. |
| dBarakatA | Calculates the probability density function of the pressure... |
| dBarakatI | Calculates the probability density function of the total... |
| echoIBM | Simulates echo sounder observations based on positions,... |
| echoIBM.add.noise | Adds noise to an array of sv-values for the ping 'indt',... |
| echoIBM.addRandomness | This function adds randomness in the fish positions and to... |
| echoIBM.addwarnings | Writes warning messages to the end of a echoIBM-dumpfile. |
| echoIBM.bgns | Expands the background noise into a matrix corresponding to... |
| echoIBM.calibrate | Calibrates (and writes the calibration data to file) the... |
| echoIBM_datasets_directory | Set the directory of the acoustic data used by the sonR... |
| echoIBM.default.oneschool | Performs default handeling of the echoIBM acoustic simulator. |
| echoIBM.distToPeak | Calculates the distance to the nearest peak of the periodic... |
| echoIBM.dump_summary | Writes a summary of a variable used by echoIBM() to the... |
| echoIBM.fishInside | Discards fish outside of the sampling region of the... |
| echoIBM.generate_dynschool | Generates the dynamic variables of schools positioned close... |
| echoIBM.generate_oneschool | Generates the position variables of one school. The fish are... |
| echoIBM.getFileTypes | Reads the header of all files in an event and classifies into... |
| echoIBM.interpolate.event | Runs through segmentation data and interpolates between... |
| echoIBM.is.schoolfiles | Simple function for recognizing and returning school files... |
| echoIBM.moveSchools | Moves compactly stored school data by time. |
| echoIBM.olpt | Calculates the one step (to the adjacet voxel of the same... |
| echoIBM.oneping.j1 | Simulates one radial sphere of one echo sounder observation... |
| echoIBM.oneping.j2 | Simulates one radial sphere (sample interval) 'j' of one echo... |
| echoIBM.oneping.oneschool | Simulates one echo sounder observation of based on positions,... |
| echoIBM.oneping.oneschool.onesample | Simulates one radial sphere of one echo sounder observation... |
| echoIBM.oneping.oneschool.passive | Simulates one echo sounder observation of based on positions,... |
| echoIBM.oneschool | Simulates echo sounder observations based on positions,... |
| echoIBM_rexp_defaults | Creates a list of default settings for noise generation... |
| echoIBM_rexp_MultSines | Calls the function rexp_MultSines(), which generates... |
| echoIBM.setup | Returns a list of the following strings: (1) the path to the... |
| echoIBM_SX90_BlindZone | Prepare for simulation of underwater acoustic data using... |
| echoIBM.w2scale | Converts from radial overlap values 'w' in sonar and... |
| etaCompression | The hydrostatic compression factor of a swim bladder. Two... |
| etaOmega | The aspect factor (cross sectional area relative to the... |
| fun_eps | Returns a function for the echo ability 'eps*' equal to the... |
| get.grid_phi | Calculates the grid of elevation angle phi, used in... |
| getSeqBarakat | Generates 'beta_n' used in dBarakatA(), pBarakatA(),... |
| get.transducerRadius2.TSD | Calculates the radii of circular transducer elements based on... |
| hist_simple | Histogram without plot, faster. |
| integrateonsphere | Numerical calculation of the surface integral of the function... |
| lineSource.TSD | Returns the theoretical far field approximation of the... |
| merge_ebpf | Merges empirical beam patterns located in separate TSD-files.... |
| nsignif | Returns an estimate of the number of significant values in... |
| omnisonar_nr0a | Generates close range noise in active mode to be used for... |
| pBarakatA | Calculates the cummulative probability function of the... |
| pBarakatI | Calculates the cummulative probability function of the total... |
| pointSource.TSD | Returns omnidirectional directional factor of dimension equal... |
| pol2sd | Gets the standard deviation to apply to the function... |
| rBarakatA | Calculates the cummulative probability function of the total... |
| rBarakatI | Calculates the cummulative probability function of the total... |
| repToExtreme | Repeats all elements of the list 'x' to the |
| rexp_MultSines | Returns an array of correlated vectors of exponentially... |
| rounded.rect | Draws a rounded rectangle. |
| set.path.vessel | Interactive function for selecting the path and speed of an... |
| set.path.vessel.cm | Wrapper for the method of drawing vessel positions based on... |
| sonR_implemented_ind | Implemented ind strings in echoIBM and realted functions |
| track.line | Returns a list of x-values and y-values of points defined by... |
| vol.sph | Calculates the (volume) size of the spherical volume segment... |
| warnings2character | Returns the warning messages stored in 'x' which is an object... |
| write.ssif | Calculates and (optionally) writes to file the spherical... |
| xy2ab | Parametrizes the piecewise linear trace given by the input.... |
