Files in aromanel/EthSEQ
Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data
DESCRIPTION
EthSEQ.Rproj
NAMESPACE
NEWS
R/RcppExports.R
R/aseq_Run.R
R/combine_Models.R
R/create_Target_Model.R
R/ethseq_Analysis.R
R/ethseq_RM.R
R/ethseq_Utilities.R
R/get_Ethnicity.R
R/get_InfoAnnot.R
R/get_Model.R
R/plot_Report.R
R/process_Population_Matrix.R
R/space_Operations.R
README.md
inst/CITATION
inst/extdata/Annotations_Test_v3.txt
inst/extdata/RefSample1.vcf
inst/extdata/RefSample2.vcf
inst/extdata/Reference.Gencode.Exome.10000SNPs.gds
inst/extdata/Samples.HGDP.10000SNPs.gds
inst/extdata/Samples.HGDP.10000SNPs.vcf
inst/extdata/exonic_kits_map.tsv
inst/extdata/old/Annotations_Test.txt
inst/extdata/old/Reference.Gencode.Exome.10000SNPs.gds
inst/extdata/old/Reference.Gencode.Exome.10000SNPs.vcf
inst/extdata/old/Reference.Gencode.Exome.10000SNPs_1.vcf.gds
inst/extdata/old/Reference.Gencode.Exome.10000SNPs_2.vcf.gds
inst/extdata/old/Reference_SS2_10000SNPs.gds
inst/extdata/old/Samples.HGDP.10000SNPs.vcf
inst/extdata/old/Samples_SS2_10000SNPs.vcf
inst/extdata/old/Target.gds
inst/extdata/old/TargetSamples_hg19_10000SNPs.gds
inst/extdata/old/TargetSamples_hg19_10000SNPs.vcf
inst/extdata/old/TargetSamples_hg38_10000SNPs.gds
inst/extdata/old/TargetSamples_hg38_10000SNPs.vcf
inst/extdata/old/VCF_Test_1.vcf
inst/extdata/old/VCF_Test_2.vcf
inst/extdata/samplesPop_map.tsv
man/ethseq.Analysis.Rd
man/ethseq.RM.Rd
man/getModelsList.Rd
man/getSamplesInfo.Rd
src/EthSEQ.so
src/RcppExports.cpp
src/RcppExports.o
src/convertGeno.cpp
src/convertGeno.o
vignettes/.gitignore
vignettes/EthSEQ.Rmd
