aroneklund/jetset: One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays

On Affymetrix gene expression microarrays, a single gene may be measured by multiple probe sets. This can present a mild conundrum when attempting to evaluate a gene "signature" that is defined by gene names rather than by specific probe sets. This package provides a one-to-one mapping from gene to "best" probe set for four Affymetrix human gene expression microarrays: hgu95av2, hgu133a, hgu133plus2, and u133x3p. This package also includes the pre-calculated probe set quality scores that were used to define the mapping.

Getting started

Package details

AuthorQiyuan Li, Aron Eklund
MaintainerAron Eklund <[email protected]>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
aroneklund/jetset documentation built on May 10, 2019, 1:46 p.m.