runInversion: Run PROSPECT inversion

In ashiklom/prospectinversion: PROSPECT inversion manuscript package

Description

Run PROSPECT inversion

Usage

runInversion(db, samplecode, modelname, custom_invert_options = NULL, ...)

Arguments

samplecode	samplecode from results table
modelname	Name of model with which to initialize table
custom_invert_options	List of invert_options to modify
...	Arguments passed on to PEcAnRTM::invert.auto observed Vector, matrix, or data frame (coerced to matrix) of observed values. For spectral data, wavelengths are rows and spectra are columns. Dimensions must align with the output of 'model'. invert.options Parameters related to inversion. return.samples Include full samples list in output. Default = TRUE. save.samples Save samples to file as the inversion proceeds (useful for debugging). If NULL, do not save samples. Default = NULL. quiet Suppress progress bar and status messages. Default=FALSE parallel Logical. Whether or not to run multiple chains in parallel on multiple cores (default = TRUE). parallel.cores Number of cores to use for parallelization. If NULL (default), allocate one fewer than detected number of cores. parallel.output Filename (or ” for stdout) for printing parallel outputs. Use with caution. Default = '/dev/null'.

ashiklom/prospectinversion documentation built on May 12, 2019, 4:40 a.m.