prepare_GNPS: prepare_GNPS
In askerdb/rCSCS: Compute the CSCS metric between metabolome samples
Description
Usage
Arguments
Value
Examples
View source: R/GNPS_functions.R
Description
prepare_GNPS
Usage
1
prepare_GNPS(ID = NULL, dir = ".", select = T, overwrite = F, mgf = F)
Arguments
ID
GNPS ID to prepare
dir
Path to put GNPS files
select
Only output features in the feature table found in the CSS matrix
overwrite
Overwrite the directory?
mgf
Download mgf file?
Value
A list of a feature matrix and a chemical similarity matrix (CSS)
Examples
1
prepare_GNPS("0310e20491314ddbbf12d56b592548b4")
askerdb/rCSCS documentation built on April 7, 2020, 10:51 a.m.
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Description Usage Arguments Value Examples
View source: R/GNPS_functions.R
Description
prepare_GNPS
Usage
1 | prepare_GNPS(ID = NULL, dir = ".", select = T, overwrite = F, mgf = F)
|
Arguments
ID |
GNPS ID to prepare |
dir |
Path to put GNPS files |
select |
Only output features in the feature table found in the CSS matrix |
overwrite |
Overwrite the directory? |
mgf |
Download mgf file? |
Value
A list of a feature matrix and a chemical similarity matrix (CSS)
Examples
1 | prepare_GNPS("0310e20491314ddbbf12d56b592548b4")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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