DRshrink: Shrinkage fix to bias in observed rates under adaptive...

In assaforon/cir: Centered Isotonic Regression and Dose-Response Utilities

Shrinkage fix to bias in observed rates under adaptive dose-finding design

Description

Adaptive dose-finding designs induce a bias on observed rates, away from the target dose. This is well-known in other adaptive-design fields, but has been overlooked by the dose-finding research community. Flournoy and Oron (2020) examine the bias in the dose-finding context, and suggest a simple shrinkage fix that reduces both bias and variance. The fix is analogous to the empirical-logit fix to binary data, but instead of adding 0.5 to each cell, target is added to the 1's at each dose, and 1-target to the 0's. The shrinkage is applied to the raw observation, so CIR or IR are carried out on the shrunk data.

Usage

DRshrink(y, x = NULL, wt0 = NULL, target, swt = 1, nmin = 2, ...)

Arguments

y	can be either of the following: y values (response rates), a 2-column matrix with positive/negative response counts by dose, a DRtrace object or a doseResponse object.
x	dose levels (if not included in y).
wt0	weights (if not included in y).
target	the balance point (between 0 and 1) around which the design concentrates allocations.
swt	the weight of the shrinkage. Default 1 (a single observation)
nmin	the minimum n at each dose, for the shrinkage to be applied. Default 2.
...	parameters passed on to doseResponse()

Author(s)

Assaf P. Oron <assaf.oron.at.gmail.com>

References

Flournoy N and Oron AP, 2020. Bias Induced by Adaptive Dose-Finding Designs. Journal of Applied Statistics 47, 2431-2442.

assaforon/cir documentation built on April 7, 2024, 12:23 p.m.