R/HCP-YA1065.R

In astamm/mascot: Macroscale Structural Connectomes via Tractography

#' HCP-YA1065 Tractography Atlas
#'
#' @description HCP-YA1065 atlas is an updated atlas from HCP-YA842 atlas. The
#'   new atlas is based on [ICBM 2009a Nonlinear
#'   Asymmetric](https://www.bic.mni.mcgill.ca/ServicesAtlases/ICBM152NLin2009)
#'   space, whereas HCP-YA842 is based on FSL’s FA map (58 FA images averaged to
#'   old MNI152). The new atlas further provides subcomponents for cingulum,
#'   SLF, corticopontine track, corticostriatal track, corticothalamic track
#'   (renamed as thalamic radiation).
#'
#' @details In R, fascicles are stored as an object of class `maf_df` which
#'   inherits from `tbl_df`, `tbl` and `data.frame` and stores, in each row,
#'   information about a single 3D point. At a bare minimum, 5 variables are
#'   stored for each point:
#'
#'   - `X`, `Y`, `Z`: 3D coordinates of the current point;
#'   - `PointId`: Identification number of the current point among all points of
#'   the streamline it belongs to;
#'   - `StreamlineId`: Identification number of the streamline which the current
#'   point belongs to.
#'
#' @source \url{https://brain.labsolver.org/hcp_trk_atlas.html}
#' @references Yeh FC, Panesar S, Fernandes D, Meola A, Yoshino M,
#'   Fernandez-Miranda JC, Vettel JM, Verstynen T. Population-averaged atlas of
#'   the macroscale human structural connectome and its network topology.
#'   Neuroimage. 2018 Sep 1;178:57-68. (original data)
#' @name HCP-YA1065
NULL

#' HCP-YA1065 Anterior Commissure
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_AC"

#' HCP-YA1065 Left Arcuate Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_AF_L"

#' HCP-YA1065 Right Arcuate Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_AF_R"

#' HCP-YA1065 Left Acoustic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_AR_L"

#' HCP-YA1065 Right Acoustic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_AR_R"

#' HCP-YA1065 Left Frontal Parietal Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_FP_L"

#' HCP-YA1065 Right Frontal Parietal Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_FP_R"

#' HCP-YA1065 Left Frontal Parahippocampal Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_FPH_L"

#' HCP-YA1065 Right Frontal Parahippocampal Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_FPH_R"

#' HCP-YA1065 Left Parahippocampal Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_PH_L"

#' HCP-YA1065 Right Parahippocampal Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_PH_R"

#' HCP-YA1065 Left Parahippocampal Parietal Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_PHP_L"

#' HCP-YA1065 Right Parahippocampal Parietal Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_PHP_R"

#' HCP-YA1065 Left Parolfactory Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_PO_L"

#' HCP-YA1065 Right Parolfactory Cingulum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_C_PO_R"

#' HCP-YA1065 Left Cerebellum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CB_L"

#' HCP-YA1065 Right Cerebellum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CB_R"

#' HCP-YA1065 Left Corticobulbar Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CBT_L"

#' HCP-YA1065 Right Corticobulbar Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CBT_R"

#' HCP-YA1065 Corpus Callosum
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CC"

#' HCP-YA1065 Left Cranial Nerve II
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNII_L"

#' HCP-YA1065 Right Cranial Nerve II
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNII_R"

#' HCP-YA1065 Left Cranial Nerve III
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNIII_L"

#' HCP-YA1065 Right Cranial Nerve III
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNIII_R"

#' HCP-YA1065 Left Cranial Nerve V
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNV_L"

#' HCP-YA1065 Right Cranial Nerve V
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNV_R"

#' HCP-YA1065 Left Cranial Nerve VII
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNVII_L"

#' HCP-YA1065 Right Cranial Nerve VII
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNVII_R"

#' HCP-YA1065 Left Cranial Nerve VIII
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNVIII_L"

#' HCP-YA1065 Right Cranial Nerve VIII
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CNVIII_R"

#' HCP-YA1065 Left Frontal Corticopontine Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CPT_F_L"

#' HCP-YA1065 Right Frontal Corticopontine Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CPT_F_R"

#' HCP-YA1065 Left Occipital Corticopontine Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CPT_O_L"

#' HCP-YA1065 Right Occipital Corticopontine Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CPT_O_R"

#' HCP-YA1065 Left Parietal Corticopontine Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CPT_P_L"

#' HCP-YA1065 Right Parietal Corticopontine Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CPT_P_R"

#' HCP-YA1065 Left Anterior Corticostriatal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CS_A_L"

#' HCP-YA1065 Right Anterior Corticostriatal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CS_A_R"

#' HCP-YA1065 Left Posterior Corticostriatal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CS_P_L"

#' HCP-YA1065 Right Posterior Corticostriatal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CS_P_R"

#' HCP-YA1065 Left Superior Corticostriatal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CS_S_L"

#' HCP-YA1065 Right Superior Corticostriatal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CS_S_R"

#' HCP-YA1065 Left Corticospinal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CST_L"

#' HCP-YA1065 Right Corticospinal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_CST_R"

#' HCP-YA1065 Left Dentatorubrothalamic Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_DRTT_L"

#' HCP-YA1065 Right Dentatorubrothalamic Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_DRTT_R"

#' HCP-YA1065 Left Extreme Capsule
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_EMC_L"

#' HCP-YA1065 Right Extreme Capsule
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_EMC_R"

#' HCP-YA1065 Left Fornix
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_F_L"

#' HCP-YA1065 Right Fornix
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_F_R"

#' HCP-YA1065 Left Frontal Aslant Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_FAT_L"

#' HCP-YA1065 Right Frontal Aslant Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_FAT_R"

#' HCP-YA1065 Left Inferior Cerebellar Peduncle
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_ICP_L"

#' HCP-YA1065 Right Inferior Cerebellar Peduncle
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_ICP_R"

#' HCP-YA1065 Left Inferior Fronto-Occipital Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_IFOF_L"

#' HCP-YA1065 Right Inferior Fronto-Occipital Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_IFOF_R"

#' HCP-YA1065 Left Inferior Longitudinal Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_ILF_L"

#' HCP-YA1065 Right Inferior Longitudinal Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_ILF_R"

#' HCP-YA1065 Middle Cerebellar Peduncle
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_MCP"

#' HCP-YA1065 Left Middle Longitudinal Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_MdLF_L"

#' HCP-YA1065 Right Middle Longitudinal Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_MdLF_R"

#' HCP-YA1065 Left Medial Lemniscus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_ML_L"

#' HCP-YA1065 Right Medial Lemniscus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_ML_R"

#' HCP-YA1065 Left Optic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_OR_L"

#' HCP-YA1065 Right Optic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_OR_R"

#' HCP-YA1065 Left Parietal Aslant Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_PAT_L"

#' HCP-YA1065 Right Parietal Aslant Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_PAT_R"

#' HCP-YA1065 Left Reticulospinal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_RST_L"

#' HCP-YA1065 Right Reticulospinal Tract
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_RST_R"

#' HCP-YA1065 Superior Cerebellar Peduncle
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_SCP"

#' HCP-YA1065 Left Superior Longitudinal Fasciculus I
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_SLF1_L"

#' HCP-YA1065 Right Superior Longitudinal Fasciculus I
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_SLF1_R"

#' HCP-YA1065 Left Superior Longitudinal Fasciculus II
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_SLF2_L"

#' HCP-YA1065 Right Superior Longitudinal Fasciculus II
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_SLF2_R"

#' HCP-YA1065 Left Superior Longitudinal Fasciculus III
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_SLF3_L"

#' HCP-YA1065 Right Superior Longitudinal Fasciculus III
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_SLF3_R"

#' HCP-YA1065 Left Anterior Thalamic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_TR_A_L"

#' HCP-YA1065 Right Anterior Thalamic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_TR_A_R"

#' HCP-YA1065 Left Posterior Thalamic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_TR_P_L"

#' HCP-YA1065 Right Posterior Thalamic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_TR_P_R"

#' HCP-YA1065 Left Superior Thalamic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_TR_S_L"

#' HCP-YA1065 Right Superior Thalamic Radiation
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_TR_S_R"

#' HCP-YA1065 Left Uncinate Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_UF_L"

#' HCP-YA1065 Right Uncinate Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_UF_R"

#' HCP-YA1065 Vermis
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_V"

#' HCP-YA1065 Left Vertical Occipital Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_VOF_L"

#' HCP-YA1065 Right Vertical Occipital Fasciculus
#' @inherit HCP-YA1065 description details source references
"HCP_YA1065_VOF_R"