API for ataudt/methimpute
Imputation-guided re-construction of complete methylomes from WGBS data
| Global functions | |
|---|---|
| arabidopsis_TEs | Man page |
| arabidopsis_chromosomes | Man page |
| arabidopsis_genes | Man page |
| arabidopsis_toydata | Man page |
| binCounts | Man page |
| binMethylome | Man page |
| binPositions | Man page |
| binning | Man page |
| binomialTestMethylation | Man page |
| callMethylation | Man page |
| callMethylationSeparate | Man page |
| collapseBins | Man page |
| distanceCorrelation | Man page |
| estimateTransDist | Man page |
| exportMethylome | Man page |
| extractCytosinesFromFASTA | Man page |
| getDistinctColors | Man page |
| getPosteriors | Man page |
| getStateColors | Man page |
| import | Man page |
| importBSMAP | Man page |
| importBSSeeker | Man page |
| importBismark | Man page |
| importMethylpy | Man page |
| importRene | Man page |
| inflateMethylome | Man page |
| loadFromFiles | Man page |
| methimpute | Man page |
| methimpute-objects | Man page |
| methimpute-package | Man page |
| methimputeBinomialHMM | Man page |
| methimputeData | Man page |
| parameterScan | Man page |
| plotConvergence | Man page |
| plotEnrichment | Man page |
| plotHistogram | Man page |
| plotPosteriorDistance | Man page |
| plotScatter | Man page |
| plotTransitionProbs | Man page |
| plotting | Man page |
| print.methimputeBinomialHMM | Man page |
| transCoord | Man page |
