Files in atredennick/IPMdoit
Contains functions to implement Integral Projection Models for multispecies plant communities.
.Rbuildignore
.Rproj.user/C22C6D84/pcs/debug-breakpoints.pper
.Rproj.user/C22C6D84/pcs/files-pane.pper
.Rproj.user/C22C6D84/pcs/workbench-pane.pper
.Rproj.user/C22C6D84/persistent-state
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.Rproj.user/C22C6D84/sdb/prop/INDEX
.gitignore
.travis.yml
DESCRIPTION
IPMdoit.Rproj
LICENSE
NAMESPACE
R/demog_stoch_fxns.R
R/estimate_crowding.R
R/estimate_crowding_ss.R
R/get_crowding.R
R/get_crowding_ss.R
R/make_inits_ipm.R
R/make_inits_ipm_ss.R
R/make_iteration_matrix.R
R/make_iteration_matrix_climate.R
R/util_functions.R
README.md
inst/examples/import2ipm_Growth.r
inst/examples/import2ipm_Recruitment.r
inst/examples/import2ipm_Survival.R
inst/examples/run_idaho_example.R
inst/extdata/Growth_params_ARTR.csv
inst/extdata/Growth_params_HECO.csv
inst/extdata/Growth_params_POSE.csv
inst/extdata/Growth_params_PSSP.csv
inst/extdata/Surv_params_ARTR.csv
inst/extdata/Surv_params_HECO.csv
inst/extdata/Surv_params_POSE.csv
inst/extdata/Surv_params_PSSP.csv
inst/extdata/recSize_ARTR.csv
inst/extdata/recSize_HECO.csv
inst/extdata/recSize_POSE.csv
inst/extdata/recSize_PSSP.csv
inst/extdata/recruit_params_GnoG.csv
man/GenerateMultivariatePoisson.Rd
man/crowd_no_overlap.Rd
man/crowd_no_overlap_ss.Rd
man/crowd_overlap.Rd
man/crowd_overlap_ss.Rd
man/expand_W_matrix.Rd
man/get_cov.Rd
man/get_pairs.Rd
man/make_K_matrix.Rd
man/make_K_matrix_clim.Rd
man/make_K_matrix_ss.Rd
man/make_K_matrix_ss_clim.Rd
man/make_K_values.Rd
man/make_K_values_clim.Rd
man/make_inits_ipm.Rd
man/make_inits_ipm_ss.Rd
man/sum_N.Rd
man/sum_cover.Rd
man/varN.Rd
man/wriG_ss.Rd
man/wriS_ss.Rd
man/wrijG.Rd
man/wrijS.Rd
