Files in aukkola/FLUXNET2015_processing
Quality control and data conversion scripts for processing FLUXNET data for land surface modelling

.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
NAMESPACE
R/Aggregation.R R/Checks.R R/Constants.R R/Conversions.R R/ConvertSpreadsheetToNcdf.R R/Gapfilling.R R/Handlers_NetCDF.R R/Handlers_csv.R R/Helpers.R R/Model_initialisations.R R/Plotting.R R/Site_metadata.R R/Synthesize_and_gapfill_functions.R R/Timing_general.R R/Utility_functions.R README.md TODO.md
data/LaThuile_site_policy.csv
data/Output_variables_FLUXNET2015_FULLSET.csv
data/Output_variables_FLUXNET2015_SUBSET.csv
data/Output_variables_LaThuile.csv
data/Output_variables_OzFlux.csv
data/README.md
data/Site_metadata.csv
document.sh
examples/FLUXNET2015/example_conversion_multiple_sites.R examples/FLUXNET2015/example_conversion_multiple_sites_parallel.R examples/FLUXNET2015/example_conversion_single_site.R examples/LaThuile/example_conversion_multiple_sites.R examples/LaThuile/example_conversion_multiple_sites_parallel.R examples/LaThuile/example_conversion_single_site.R
install.sh
man/AnnualCycle.Rd man/ChangeUnits.Rd man/CheckCSVTiming.Rd man/CheckDataGaps.Rd man/CheckDataRanges.Rd man/Create2Uchar.Rd man/CreateFluxNetcdfFile.Rd man/CreateMetNetcdfFile.Rd man/CreateTimeunits.Rd man/DayNight.Rd man/DiurnalCycle.Rd man/FillQCvarMissing.Rd man/FindExcludeEval.Rd man/FindFluxInd.Rd man/FindTimeVarName.Rd man/GapfillFlux.Rd man/GapfillMet_statistical.Rd man/GapfillMet_with_ERA.Rd man/GetNumberTimesteps.Rd man/GetTimeUnits.Rd man/GetTimestepSize.Rd man/GetTimingNcfile.Rd man/InitialChecks.Rd man/IsWholeYrs.Rd man/ReadCSVFluxData.Rd man/Rel2SpecHumidity.Rd man/SynthesizeLWdown.Rd man/SynthesizePSurf.Rd man/Timeseries.Rd man/VPD2RelHum.Rd man/Yeardays.Rd man/add_processing_info.Rd man/add_processing_metadata.Rd man/aggregate_tsteps.Rd man/append_and_warn.Rd man/append_qc.Rd man/calc_avPrecip.Rd man/calc_esat.Rd man/celsius_to_kelvin.Rd man/check_flx2015_version.Rd man/check_missing.Rd man/convertToHoursMins.Rd man/convert_LaThuile.Rd man/convert_LaThuile_time.Rd man/convert_OzFlux.Rd man/convert_fluxnet_to_netcdf.Rd man/copyfill_data.Rd man/create_dummy_year.Rd man/create_outdir.Rd man/create_qc_var.Rd man/define_model_params.Rd man/doydate.Rd man/duplicate_columns.Rd man/findColIndices.Rd man/findStartTime.Rd man/findTimeInfo.Rd man/find_ind_and_qc.Rd man/gapfill_LWdown_Pair.Rd man/gapfill_with_ERA.Rd man/getMonthDays.Rd man/get_default_conversion_options.Rd man/get_fluxdata_org_site_codes.Rd man/get_fluxdata_org_site_metadata.Rd man/get_fluxnet_erai_files.Rd man/get_fluxnet_erai_template.Rd man/get_fluxnet_file_template.Rd man/get_fluxnet_files.Rd man/get_fluxnet_version_no.Rd man/get_git_version.Rd man/get_lathuile_datapolicy.Rd man/get_ornl_site_codes.Rd man/get_ornl_site_metadata.Rd man/get_ornl_site_url_list.Rd man/get_path_site_code.Rd man/get_qc_flags.Rd man/get_site_code.Rd man/get_site_fluxdata_org_url.Rd man/get_site_metadata.Rd man/get_site_metadata_from_CSV.Rd man/get_site_metadata_web.Rd man/get_site_ornl_url.Rd man/get_varnames.Rd man/initialise_model.Rd man/initialise_sitelog.Rd man/is.leap.Rd man/linfill_data.Rd man/log_error.Rd man/log_warning.Rd man/metadata_list_to_dataframe.Rd man/no_error.Rd man/plot_nc.Rd man/preprocess_OzFlux.Rd man/qc_frac.Rd man/read_era.Rd man/regfill_flux.Rd man/regpredict.Rd man/regtrain.Rd man/remove_duplicates.Rd man/retrieve_atts.Rd man/retrieve_ranges.Rd man/retrieve_units.Rd man/retrieve_varinfo.Rd man/save_metadata_list_to_csv.Rd man/save_metadata_to_csv.Rd man/site_metadata_template.Rd man/stop_and_log.Rd man/update_csv_from_web.Rd man/update_metadata.Rd man/update_qc.Rd man/warn_and_log.Rd man/warn_missing_metadata.Rd man/write_log.Rd
src/Makefile
src/zzz.R tests/testthat.R
aukkola/FLUXNET2015_processing documentation built on Aug. 9, 2018, 5:24 a.m.