build.matrix: Build list of matrices with different types of tissues
In averissimo/tcga.data.utils: Utility functions to tcga data packages from averissimo/tcga.data
Description
Usage
Arguments
Value
Examples
Description
Build list of matrices with different types of tissues
Usage
1
build.matrix(source.name, assay.data)
Arguments
source.name
data type
assay.data
data from MultiAssayExperiment
Value
data divided by tissue type, with clinical and source.name assay
Examples
1
2
3
4
5
data('multiAssay')
fpkm.data <- build.matrix('RNASeqFPKM', multiAssay)
fpkm.per.tissue <- fpkm.data$data
fpkm.clinical <- fpkm.data$clinical
names(fpkm.per.tissue)
averissimo/tcga.data.utils documentation built on May 31, 2019, 1:54 p.m.
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Description Usage Arguments Value Examples
Description
Build list of matrices with different types of tissues
Usage
1 | build.matrix(source.name, assay.data)
|
Arguments
source.name |
data type |
assay.data |
data from MultiAssayExperiment |
Value
data divided by tissue type, with clinical and source.name assay
Examples
1 2 3 4 5 | data('multiAssay')
fpkm.data <- build.matrix('RNASeqFPKM', multiAssay)
fpkm.per.tissue <- fpkm.data$data
fpkm.clinical <- fpkm.data$clinical
names(fpkm.per.tissue)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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