checkGEOmetatype: Check GEO metadata for supported dataset type

In avucoh/DIVE: Data Integration and Visual Exploration

Check GEO metadata for supported dataset type

Description

Check GEO metadata for supported dataset type

Usage

checkGEOmetatype(
  eset,
  supported = c("Expression profiling by array",
    "Expression profiling by high throughput sequencing",
    "Protein profiling by protein array", "Methylation profiling by array",
    "Methylation profiling by high throughput sequencing")
)

Details

For reference: https://www.ncbi.nlm.nih.gov/gds/advanced/ -> select field "Dataset Type" -> show index list

See Also

Other checkGEO functions: checkGEOmatrixfile(), checkGEOplatform(), checkGEOwrapper()

avucoh/DIVE documentation built on Aug. 29, 2023, 6:02 p.m.