ipfp: Function to run IPFP (iterative proportional fitting...

Description Usage Arguments Value Examples

Description

Use IPFP starting from x0 to produce vector x s.t. Ax = y within tolerance. Need to ensure that x0 > 0.

Usage

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ipfp(y, A, x0, tol = sqrt(.Machine$double.eps), maxit = 1000,
  verbose = FALSE, full = FALSE)

Arguments

y

numeric constraint vector (length nrow)

A

constraint matrix (nrow x ncol)

x0

numeric initial vector (length ncol)

tol

numeric tolerance for IPFP; defaults to sqrt(.Machine$double.eps)

maxit

integer maximum number of iterations for IPFP; defaults to 1e3

verbose

logical parameter to select verbose output from C function

full

logical parameter to select full return (with diagnostic info)

Value

if not full, a vector of length ncol containing solution obtained by IPFP. If full, a list containing solution (as x), the number of iterations (as iter), and the L2 norm of Ax - y (as errNorm)

Examples

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A <- matrix(c(1,0,0, 1,0,0, 0,1,0, 0,1,0, 0,0,1), nrow=3)
x <- rgamma(ncol(A), 10, 1/100)
y <- A %*% x
x0 <- x * rgamma(length(x), 10, 10)
ans <- ipfp(y, A, x0, full=TRUE)
print(ans)
print(x)

awblocker/ipfp documentation built on May 11, 2019, 4:10 p.m.