RAGP_annots: Annotations for single neurons from the Right Atrial...

In axm323/dataVisEasy: datavisEasy: Data visualizations Using Annotations Made Easy

Annotations for single neurons from the Right Atrial Ganglionated Plexus of a Yucatan Minipig

Description

Annotations for 405 single neurons across 4 Pigs that were assayed for expression of 266 genes through HT-qPCR. See RAGP_rawCt for the raw Ct values and RAGP_norm for the normalized and trimmed data. This data is used in examples for functions in the dataVisEasy package.

Usage

RAGP_annots

Format

A data frame with 405 rows (samples) and 8 variables:

Sample_ID

Sample name for 405 single neurons

Section

Section number from which the sample was taken

Cap_ID

Cap_ID indicating which sample from the given section

Connectivity

Whether the single neuron (sample) in question is projecting to the SA-Node (based on FastBlue tracer)

Animal

Animal specimen from which the sample originated

State

Identified transcriptional state (see Moss et al. in Review)

Sub_State

Identified transcriptional states, some of which have further substates

Sex

Sex of the animal from which the sample originated

Source

Data can be found at GEO reference ID: GSE149212 and on sparc.science portal at DOI: 10.26275/5jki-b4er

axm323/dataVisEasy documentation built on Feb. 1, 2024, 11:53 p.m.