plotCoefficients: plot coefficients of a gene given a DESeqDataSet (DESeq2 >...

In baj12/idealImmunoTP: Interactive Differential Expression AnaLysis

plot coefficients of a gene given a DESeqDataSet (DESeq2 > v1.16)

Description

plotCoeficients plot coefficients of a gene given a DESeqDataSet (DESeq2 > v1.16)

Usage

plotCoefficients(dds, geneName, legend = TRUE)

Arguments

dds	DESeq2 object (DESeqDataSet)
geneName	name of the gene to be plotted, needs to be in the rownames of dds
legend	(TRUE/FALSE, default TRUE), whether or not to plot the legend inside the plot. the position is chosen automatically based on the last coefficient to be plotted.

Value

returns nothing

Examples

dds <- DESeq2::makeExampleDESeqDataSet()
dds = DESeq2::DESeq(dds)
plotCoefficients(dds, "gene930")

baj12/idealImmunoTP documentation built on Nov. 19, 2024, 11:11 a.m.