Files in bakaburg1/BaySREn

BaySREn. An R package to automatise citation collection and screening in Systematic Reviews. Based on Bayesian active machine learning

CONTRIBUTING.md LICENSE.md R/Analysis.R R/BaySREn-package.R R/Helpers.R R/Model.R R/NLP.R R/Record_management.R R/Record_search.R R/Reporting.R R/Rule_building.R README.Rmd README.md man/BaySREn-package.Rd man/DTM.add_ngrams.Rd man/DTM.aggr_synonyms.Rd man/add_cumulative.Rd man/add_negative_terms.Rd man/analyse_grid_search.Rd man/clean_date_filter_arg.Rd man/clean_record_textfields.Rd man/coalesce_labels.Rd man/compute_BART_model.Rd man/compute_changes.Rd man/consolidate_results.Rd man/create_annotation_file.Rd man/create_session.Rd man/create_training_set.Rd man/enrich_annotation_file.Rd man/estimate_performance.Rd man/estimate_positivity_rate_model.Rd man/extract_rules.Rd man/extract_source_file_paths.Rd man/extract_var_imp.Rd man/fix_duplicated_records.Rd man/format_interval.Rd man/format_performance.Rd man/format_var_imp.Rd man/generate_rule_selection_set.Rd man/get_session_files.Rd man/get_source_distribution.Rd man/import_classification.Rd man/import_data.Rd man/join_records.Rd man/lemmatize.Rd man/order_by_query_match.Rd man/parse_embase.Rd man/parse_ieee.Rd man/parse_pubmed.Rd man/parse_scopus.Rd man/parse_wos.Rd man/perform_grid_evaluation.Rd man/perform_search_session.Rd man/plot_classification_trend.Rd man/plot_predictive_densities.Rd man/print_table.Rd man/read_bib_files.Rd man/rules_to_query.Rd man/search_ieee.Rd man/search_pubmed.Rd man/search_wos.Rd man/simplify_ruleset.Rd man/source_session_summary_to_list.Rd man/summarise_annotations.Rd man/summarise_annotations_by_session.Rd man/summarise_by_source.Rd man/summarise_sources_by_session.Rd man/summarise_vector.Rd man/text_to_DTM.Rd man/tokenize_MESH.Rd man/tokenize_authors.Rd man/tokenize_keywords.Rd man/tokenize_text.Rd tests/testthat.R tests/testthat/_snaps/create_session_data.md tests/testthat/_snaps/parsers.md tests/testthat/setup.R tests/testthat/test-IEEE_search.R tests/testthat/test-Pubmed_search.R tests/testthat/test-WOS_search.R tests/testthat/test-classification.R tests/testthat/test-create_session_data.R tests/testthat/test-parsers.R