parse_pubmed: Parse Pubmed raw data

In bakaburg1/BaySREn: BaySREn. An R package to automatise citation collection and screening in Systematic Reviews. Based on Bayesian active machine learning

Parse Pubmed raw data

Description

Parse and normalize Pubmed ".nbib" files downloaded through https://pubmed.ncbi.nlm.nih.gov/.

Usage

parse_pubmed(entries, timestamp = now())

Arguments

entries	A character vector containing the citation data.
timestamp	A timestamp as provided by lubridate::now().

Value

A data frame with the parsed data.

Examples

## Not run: 
dataRaw <- readr::read_file(file.path(
  "Records", "Session 1", "Query",
  "Pubmed.nbib"
))

parse_pubmed(dataRaw)

## End(Not run)

bakaburg1/BaySREn documentation built on March 30, 2022, 12:16 a.m.