API for barakbri/dacomp
Non parametric differential abundance testing for microbiome counts data.
| Global functions | |
|---|---|
| Compute.resample.test | Source code |
| SignedRankWilcoxon.statistic | Source code |
| check.input.generate_example_dataset | Source code |
| check.input.generate_example_dataset_continuous | Source code |
| check.input.main | Source code |
| check.input.plot_reference_scores | Source code |
| check.input.select_references | Source code |
| compare_to_gold_standard | Source code |
| dacomp.generate_example_dataset.two_sample | Man page Source code |
| dacomp.generate_example_dataset_continuous | Man page Source code |
| dacomp.generate_example_dataset_multivariate_example | Man page Source code |
| dacomp.generate_example_dataset_paired | Man page Source code |
| dacomp.plot_reference_scores | Man page Source code |
| dacomp.select_references | Man page Source code |
| dacomp.test | Man page Source code |
| dacomp.validate_references | Man page Source code |
| description_for_KS | Source code |
| dsfdr_find_thresholds | Source code |
| get_kostic_data | Source code |
| leave_one_out_validation | Source code |
| parallel_reference_select | Source code |
| print.dacomp.reference.selection.object | Man page Source code |
| print.dacomp.reference.validation.result.object | Man page Source code |
| print.dacomp.result.object | Man page Source code |
| rcpp_Compute_Wilcoxon_Signed_Rank_Stat | Source code |
| rcpp_KW_PermTest_Given_Permutations | Source code |
| rcpp_Spearman_PermTest_Given_Permutations | Source code |
| rcpp_TwoPartTest_Given_Permutations | Source code |
| rcpp_Welch_PermTest_Given_Permutations | Source code |
| rcpp_Wilcoxon_PermTest_Given_Permutations | Source code |
| select_references_by_n | Source code |
