Man pages for barakbri/dacomp
Non parametric differential abundance testing for microbiome counts data.
| dacomp.generate_example_dataset_continuous | Generate a simulated dataset with a continuous phenotype,... |
| dacomp.generate_example_dataset_multivariate_example | Generate an example dataset with a multivariate phenotype |
| dacomp.generate_example_dataset_paired | Generate a simulated dataset for a paired study design. |
| dacomp.generate_example_dataset.two_sample | Generate a simulated two sample dataset, based on data from... |
| dacomp.plot_reference_scores | Plot histogram of median SD statistics from a reference... |
| dacomp.select_references | Select a set of reference taxa, used for testing differential... |
| dacomp.test | Test taxa for differential abundance, using a given set of... |
| dacomp.validate_references | Diagnostic procedure for DACOMP reference set. |
| print.dacomp.reference.selection.object | Print information on the selected reference set, given an... |
| print.dacomp.reference.validation.result.object | Print the results of an object from type... |
| print.dacomp.result.object | Print the results contained in an object from type... |
