R/data.R

In barnabywalker/tidyassessments: Model Wrappers for Automated Conservation Assessments

#' Extinction risk predictors for Myrcia species.
#'
#' A dataset containing predictors to use in automated conservation
#' methods for species of the genus *Myrcia*. These predictors were prepared for
#' the paper [Evidence-based guidelines for automated assessments of plant species](https://doi.org/10.32942/osf.io/zxq6s),
#' and described in detail there. The dataset contains a mixture of assessed and unassessed species.
#' Assessments were compiled from the [IUCN Red List v.2021-3](https://www.iucnredlist.org/) and predictors were calculated across
#' observed localities for each species as downloaded from [GBIF](https://www.gbif.org/occurrence/download/0132231-210914110416597).
#'
#' @format A data frame with 666 rows and 18 variables:
#' \describe{
#'   \item{wcvp_id}{a unique identifier for the species, from [WCVP](https://wcvp.science.kew.org/)},
#'   \item{eoo}{Extent of occurrence (EOO), in km^2},
#'   \item{human_footprint}{a measure of the impact of human activities, in 2009},
#'   \item{human_population}{human population density in 2020, in persons/km^2},
#'   \item{forest_loss}{proportion of a species observed localities that underwent forest loss between 2000-2019},
#'   \item{annual_temperature}{mean average temperature, in degrees-C},
#'   \item{precipitation_driest}{precipitation in the driest quarter, in mm},
#'   \item{elevation}{elevation, in m},
#'   \item{conr_eoo}{EOO, as calculated by [ConR](https://gdauby.github.io/ConR/), in km^2},
#'   \item{conr_aoo}{Area of occupancy (AOO), as calculated by [ConR](https://gdauby.github.io/ConR/), in km^2},
#'   \item{conr_locs}{Number of locations estimated by [ConR](https://gdauby.github.io/ConR/)},
#'   \item{conr_obs}{Number of unique observations calculated by [ConR](https://gdauby.github.io/ConR/)},
#'   \item{n_specimens}{Total number of observations},
#'   \item{centroid_latitude}{Latitude of range centroid, in decimal-degrees},
#'   \item{name}{species name, as listed in [WCVP](https://wcvp.science.kew.org/)},
#'   \item{category}{IUCN Red List category, if assessed},
#'   \item{genus}{genus of species, as listed in [WCVP](https://wcvp.science.kew.org/)},
#'   \item{section}{section of species, as detailed in [Lucas et al. (2019)](https://doi.org/10.1007/s12225-017-9730-5)}
#' }
#' @source \url{https://doi.org/10.32942/osf.io/zxq6s}
"myrcia_predictors"