Man pages for barryrowlingson/PrevMap
Geostatistical Modelling of Spatially Referenced Prevalence Data

adjust.sigma2Adjustment factor for the variance of the convolution of...
autocor.plotPlot of the autocorrelgram for posterior samples
binomial.logistic.BayesBayesian estimation for the binomial logistic model
binomial.logistic.MCMLMonte Carlo Maximum Likelihood estimation for the binomial...
coef.PrevMapExtract model coefficients
continuous.sampleSpatially continuous sampling
contour.pred.PrevMapContour plot of a predicted surface
control.mcmc.BayesControl settings for the MCMC algorithm used for Bayesian...
control.mcmc.MCMLControl settings for the MCMC algorithm used for classical...
control.priorPriors specification
control.profileAuxliary function for controlling profile log-likelihood in...
create.ID.coordsID spatial coordinates
data_simSimulated binomial data-set over the unit square
dens.plotDensity plot for posterior samples
discrete.sampleSpatially discrete sampling
Laplace.samplingLangevin-Hastings MCMC for conditional simulation
Laplace.sampling.lrLangevin-Hastings MCMC for conditional simulation (low-rank...
linear.model.BayesBayesian estimation for the geostatistical linear Gaussian...
linear.model.MLEMaximum Likelihood estimation for the geostatistical linear...
loaloaLoa loa prevalence data from 197 village surveys
loglik.ciProfile likelihood confidence intervals
loglik.linear.modelProfile log-likelihood or fixed parameters likelihood...
matern.kernelMatern kernel
plot.pred.PrevMapPlot of a predicted surface
plot.profile.PrevMapPlot of the profile log-likelihood for the covariance...
plot.shape.maternPlot of the profile likelihood for the shape parameter of the...
shape.maternProfile likelihood for the shape parameter of the Matern...
spatial.pred.binomial.BayesBayesian spatial predictions for the binomial logistic model
spatial.pred.binomial.MCMLSpatial predictions for the binomial logistic model using...
spatial.pred.linear.BayesBayesian spatial predictions for the geostatistical Linear...
spatial.pred.linear.MLESpatial predictions for the geostatistical Linear Gaussian...
summary.Bayes.PrevMapSummarizing Bayesian model fits
summary.PrevMapSummarizing likelihood-based model fits
trace.plotTrace-plots for posterior samples
barryrowlingson/PrevMap documentation built on June 4, 2017, 1:14 a.m.