get_pwe_contrasts: Utility function to extract HR estimates from piece-wise...

In bashlee/test: Provides a suite of extension functions for NMA using the `gemtc` package

Description

Utility function to extract HR estimates from piece-wise exponential model fit in (format needed for ggplot)

Usage

get_pwe_contrasts(fit, treatments, cut.pts, ref = "Atezolizumab+Bevacizumab",
  reverse = FALSE, exponentiate = TRUE, xmax = 24, digits = 3,
  alpha = 0.05)

Arguments

fit	rjags object which is the return of R2jags::jags()
treatments	Vector of treatment names (character string) ordered according to array indexes in jags fit.
cut.pts	Numeric vector with cut points of piece-wise exponential model.
ref	Character string identifying reference treatment to use in calculating contrasts.
reverse	Logical, if TRUE (default) "ref vs others" is calculated (instead of "others vs ref").
exponentiate	Logical, if TRUE (default) contrast estimates are exponentiated in output.

Value

A data.frame contatining hazzard ratio estimates from an rjags object which is the return of R2jags::jags()

bashlee/test documentation built on June 22, 2019, 12:42 a.m.