format_CFU: format_CFU This function is used to parse an excel template...
In baynec2/biolabr: Useful functions for the biologist
format_CFU R Documentation
format_CFU
This function is used to parse an excel template containing colony counts and metadata corresponding to CFU spots on agar plates and assign the appropriate sample.IDs.
Note that this function assumes that 2uL is plated for each spot.
Description
format_CFU
This function is used to parse an excel template containing colony counts and metadata corresponding to CFU spots on agar plates and assign the appropriate sample.IDs.
Note that this function assumes that 2uL is plated for each spot.
Usage
format_CFU(Filepath, Dilution_orientation = "Row")
Arguments
Filepath
= The file path to the filled out excel template containing the colony counts and metadata . This must be the specific excel template designed for use with this function
Dilution_orientation
= Specify whether the dilution is oriented row wise or plate wise.
Value
= a data frame with the calculated CFU/mL for each Sample.ID
Examples
df = format_CFU(Filepath = "/filepath",Dilution_orientation = "Row")
baynec2/biolabr documentation built on Aug. 8, 2022, 12:02 a.m.
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| format_CFU | R Documentation |
format_CFU This function is used to parse an excel template containing colony counts and metadata corresponding to CFU spots on agar plates and assign the appropriate sample.IDs. Note that this function assumes that 2uL is plated for each spot.
Description
format_CFU This function is used to parse an excel template containing colony counts and metadata corresponding to CFU spots on agar plates and assign the appropriate sample.IDs. Note that this function assumes that 2uL is plated for each spot.
Usage
format_CFU(Filepath, Dilution_orientation = "Row")
Arguments
Filepath |
= The file path to the filled out excel template containing the colony counts and metadata . This must be the specific excel template designed for use with this function |
Dilution_orientation |
= Specify whether the dilution is oriented row wise or plate wise. |
Value
= a data frame with the calculated CFU/mL for each Sample.ID
Examples
df = format_CFU(Filepath = "/filepath",Dilution_orientation = "Row")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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