cleaning: cleaning

In bbica/MetaViral:

cleaning

Description

cleans the output from vcontact2 or DRAM-v #'

Usage

cleaning(
  viral_data,
  output_from = "vcontact2",
  remove_flags = c("F", "T", "P", "A"),
  max_aux_score = 3,
  ...
)

Arguments

viral_data	file to be clean
output_from	vcontact2 or DRAMv
remove_flags	flags to remove
max_aux_score	maximun auxiliary score
...	others

Examples

## Not run: 
quiet(cat("test"))
quiet(warning("test"))
quiet(warning("test"), all=T)

## End(Not run)
# This is a function that suppresses log info

bbica/MetaViral documentation built on June 23, 2022, 7:11 p.m.