Description Usage Format Value Fields
Class that encapsulates a layer used for dispalying slices of a 3D volume.
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R6Class
object.
Object of R6Class
with methods for accessing and changing layer properties.
vol
an object of class NeuroVol
supplying the image data
color_map
the color map
threshold
the low and high thresholds to determine transparency.
irange
the intensity range of the low and high end of color scale.
view
the orientation code (e.g. "LPI") describing the display axes.
zero_col
the color assigned to values of 0.
alpha
the degree of opacity for the layer (0 = transparent, 1 = opaque)
view_space
the linkS4class{NeuroSpace}
associaed with the view.
value_range
the full numeric range of the underlying volume
desc
a short character
description of the layer
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