tests/testthat/_snaps/utils.md
In bcgov/rems2aquachem: BC Groundwater Chemistry Analysis Tool
internal data correct
Code
meq_conversion
Output
# A tibble: 18 x 4
param mass valency_state conversion
<chr> <dbl> <dbl> <dbl>
1 Al_diss 8.99 1 8.99
2 CO3 60.0 2 30.0
3 Ca 40.1 2 20.0
4 Cl 35.5 1 35.5
5 Cu_diss 63.5 2 31.8
6 F 19.0 1 19.0
7 Fe_diss 55.8 2 27.9
8 HCO3 61.0 1 61.0
9 K 39.1 1 39.1
10 Meas_Alk 100. 2 50.0
11 Mg 24.3 2 12.2
12 Mn_diss 54.9 2 27.5
13 NH4 14.0 1 14.0
14 NO2 14.0 1 14.0
15 NO3 14.0 1 14.0
16 Na 23.0 1 23.0
17 SO4 96.1 2 48.0
18 Zn_diss 65.4 2 32.7
water_type
{
"type": "list",
"attributes": {
"names": {
"type": "character",
"attributes": {},
"value": ["Sample_Date", "SampleID", "StationID", "Cl_meq", "SO4_meq", "HCO3_meq", "Meas_Alk_meq", "Ca_meq", "Mg_meq", "Na_meq", "K_meq", "charge_balance", "water_type"]
},
"row.names": {
"type": "integer",
"attributes": {},
"value": [1, 2, 3, 4]
},
"class": {
"type": "character",
"attributes": {},
"value": ["tbl_df", "tbl", "data.frame"]
}
},
"value": [
{
"type": "double",
"attributes": {
"class": {
"type": "character",
"attributes": {},
"value": ["Date"]
}
},
"value": [16500, 16489, 16849, 17051]
},
{
"type": "character",
"attributes": {},
"value": ["E292373-1", "E298873-1", "E298873-2", "E298873-3"]
},
{
"type": "character",
"attributes": {},
"value": ["426", "451", "451", "451"]
},
{
"type": "double",
"attributes": {},
"value": [0.05077144, 0.36668265, 0.23411277, 0.16952021]
},
{
"type": "double",
"attributes": {},
"value": [0.02519191, 0.06995438, 0.06662322, 0.07307735]
},
{
"type": "double",
"attributes": {},
"value": ["NA", 0.50970321, 0.50150862, 0.56870422]
},
{
"type": "double",
"attributes": {},
"value": [1.32285044, 0.50955719, 0.61146863, 0.69339744]
},
{
"type": "double",
"attributes": {},
"value": [0.92819003, 0.55391986, 0.4935376, 0.5139977]
},
{
"type": "double",
"attributes": {},
"value": [0.3488994, 0.14811767, 0.12919152, 0.1505863]
},
{
"type": "double",
"attributes": {},
"value": [0.17486038, 0.26272555, 0.22444766, 0.21531316]
},
{
"type": "double",
"attributes": {},
"value": [0.03401682, 0.03708601, 0.03529565, 0.03836484]
},
{
"type": "double",
"attributes": {},
"value": [3.4, 1, -4.2, -4.1]
},
{
"type": "character",
"attributes": {},
"value": ["Ca-Mg-HCO3*", "Ca-Na-HCO3-Cl", "Ca-Na-HCO3-Cl", "Ca-Na-HCO3"]
}
]
}
dominant_water_types()
{
"type": "list",
"attributes": {
"names": {
"type": "character",
"attributes": {},
"value": ["Sample_Date", "SampleID", "Coord_Lat", "Project", "Coord_Long", "StationID", "Watertype", "Analysis_Date", "shortWatertype", "Comment", "Reference", "Quality_control", "Duplicate_ID", "Labcode", "Location", "Geology", "X", "Y", "Elevation", "Well_Depth", "Screen_Top", "Screen_Mid", "Screen_Bottom", "Gradient", "Station_Comment", "Sample_Depth", "Temp", "14C", "18O", "2H", "Ag_diss", "Ag_tot", "Al_diss", "Al_tot", "As_diss", "As_tot", "B", "B_tot", "Ba", "Ba_tot", "Benzene", "Br", "CN_diss", "CN_tot", "CO3", "Ca", "Ca_tot", "Cd_diss", "Cd_tot", "Cl", "Co_diss", "Co_tot", "Cond", "Cond_field", "Cr_III_diss", "Cr_VI_diss", "Cr_diss", "Cr_tot", "Cu_diss", "Cu_tot", "DO", "Density", "Eh", "Ethylbenzene", "F", "Fe_III_diss", "Fe_II_diss", "Fe_diss", "Fe_tot", "HCO3", "Hg_diss", "Hg_tot", "K", "K_tot", "Li", "Li_tot", "Meas_Alk", "Meas_Hardness", "Mg", "Mg_tot", "Mn_diss", "Mn_tot", "Mo_diss", "Mo_tot", "NH4", "NH4_tot", "NO2", "NO3", "Na", "Na_tot", "Ni_diss", "Ni_tot", "PCE", "Pb_diss", "Pb_tot", "SO4", "Sb_diss", "Sb_tot", "Se_diss", "Se_tot", "Si", "Si_tot", "Sr", "Sr_tot", "TCE", "TOC", "TSS", "Tl_diss", "Tl_tot", "Toluene", "Tritium", "U_diss", "U_tot", "V_diss", "V_tot", "Vinyl chloride", "Xylene", "Zn_diss", "Zn_tot", "pH_field", "pH_lab", "Phosphorus_Total", "Alkalinity;_Phenolphthalein_(as_CaCO3)", "Phosphorus_Total_Dissolved", "Nitrogen_Kjel_Tot(N)", "Nitrate(NO3)_+_Nitrite(NO2)_Dissolved", "Silica_Reactive_Diss", "Residue:_Filterable_1_0u_(TDS)", "Phosphorus_Ort_Dis-P", "Bismuth_Dissolved", "Beryllium_Total", "Zirconium_Total", "Beryllium_Dissolved", "Titanium_Total", "Titanium_Dissolved", "Sulfur_Dissolved", "Tellurium_Total", "Tellerium_Dissolved", "Coliform_-_Total", "Sulfur_Total", "Tin_Total", "Coliform_-_Fecal", "Bismuth_Total", "Tin_Dissolved", "Zirconium_Dissolved", "Nitrogen_NO2_Total", "Acidity_pH_8_3_(as_CaCO3)", "Nitrogen_Total", "Alkalinity_pH_4_5/4_2", "Hardness_Total_(Total)", "Sulfate_Total", "Fluoride_Total", "Turbidity", "Color_True", "Carbon_Total_Organic", "Nitrogen_Organic-Total", "Nitrogen_(Kjeldahl)_Total_Dissolved", "Nitrogen_Total_Dissolved", "Total_Nitrogen_NO2_+_NO3", "Mirex", "Phorate", "Bromophos_Ethyl", "Phosalone", "Metolachlor", "Chlorfenvinphos", "Hexachlorobenzene", "Chlorbenside", "Demeton", "Atrazine", "Tolyfluanid", "Dicrotophos", "Carbophenthion", "Desmetryn", "Pronamide", "Endosulfan_Sulphate", "Quinalophos", "Benfluralin", "Methoxychlor", "Diazinon", "Parathion", "Alachlor", "Malaoxon", "Dicofol", "p;p'-DDE", "Parathion_Methyl", "Dichlorbenil", "Malathion", "Pirimiphos_Ethyl", "Ethalfluralin", "Tecnazene", "Endosulfan_I", "Phosmet", "Chlormephos", "Dichlorfluanid", "Endosulfan_II", "Terbuthylazine", "Captan", "Iodofenphos", "Bromacil", "Prometryne", "Terbutryn", "Dicloran", "Triadimefon", "gamma-Chlordane", "Dimethoate", "Cyanazine", "Phosphamidon", "Butylate", "Terbufos", "Fenitrothion", "Omethoate", "Chlorthiophos", "DACTHAL_(DCPA)", "Dioxathion", "Eptam", "Chlorpropham", "Fenthion", "Simazine", "Metribuzin", "Heptachlor", "Lindane", "Isofenphos", "Sulfotep", "Aspon", "alpha-Chlordane", "Quintozene", "Dieldrin", "Hexazinone", "p;p'-DDT", "Aldrin", "Chlorpyrifos", "Tetrachlorvinphos", "Chlorfenson", "Fonofos", "Tetradifon", "De-ethyl_Atrazine", "Triallate", "Profluralin", "Vinclozolin", "Bromophos", "Trifluralin", "EPN", "Cyanophos", "Methidathion", "Ethion", "Disulfoton", "Dichlofenthion", "Pirimicarb", "Procymidone", "BHC;_beta", "BHC;_alpha", "Chlorothalonil", "Nitrofen", "Pirimiphos-methyl", "Endrin", "Propazine", "Metalaxyl", "Fensulfothion", "Diallate", "Diphenylamine", "Folpet", "Cyanide_S_A_D_", "Mercury_Dissolved", "Nitrogen_Organic_Total_Dissolved", "Hydroxide_Alkalinity_(as_CaCO3)", "Oxid__Red__Potential", "Temperature", "Temperature-Field", "Al_diss_meq", "CO3_meq", "Ca_meq", "Cl_meq", "Cu_diss_meq", "F_meq", "Fe_diss_meq", "HCO3_meq", "K_meq", "Meas_Alk_meq", "Mg_meq", "Mn_diss_meq", "NH4_meq", "NO2_meq", "NO3_meq", "Na_meq", "SO4_meq", "Zn_diss_meq", "anion_sum", "cation_sum", "charge_balance", "water_type", "missing_ion"]
},
"row.names": {
"type": "integer",
"attributes": {},
"value": [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40]
},
"class": {
"type": "character",
"attributes": {},
"value": ["tbl_df", "tbl", "data.frame"]
}
},
"value": [
{
"type": "character",
"attributes": {},
"value": ["", "1985-09-10", "1997-10-16", "2000-11-15", "2001-11-07", "2003-06-25", "2003-12-23", "2004-03-09", "2004-10-27", "2005-03-03", "2005-09-30", "2006-02-02", "1986-04-01", "2006-09-05", "2007-03-01", "2007-10-31", "2008-02-18", "2008-09-10", "2009-02-16", "2009-08-31", "2010-03-04", "2010-10-20", "2011-03-01", "1987-10-22", "2011-09-14", "2012-02-23", "2012-11-01", "2013-02-25", "2013-10-09", "2014-03-17", "2014-10-02", "2015-02-18", "2016-02-22", "2017-07-20", "1988-10-27", "1989-08-17", "1990-10-10", "1991-11-21", "1992-01-29", "1993-02-18"]
},
{
"type": "character",
"attributes": {},
"value": ["", "1401057-1", "1401057-10", "1401057-11", "1401057-12", "1401057-13", "1401057-14", "1401057-15", "1401057-16", "1401057-17", "1401057-18", "1401057-19", "1401057-2", "1401057-20", "1401057-21", "1401057-22", "1401057-23", "1401057-24", "1401057-25", "1401057-26", "1401057-27", "1401057-28", "1401057-29", "1401057-3", "1401057-30", "1401057-31", "1401057-32", "1401057-33", "1401057-34", "1401057-35", "1401057-36", "1401057-37", "1401057-38", "1401057-39", "1401057-4", "1401057-5", "1401057-6", "1401057-7", "1401057-8", "1401057-9"]
},
{
"type": "character",
"attributes": {},
"value": ["°", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101", "49.017101"]
},
{
"type": "character",
"attributes": {},
"value": ["", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND", "BACKGROUND"]
},
{
"type": "character",
"attributes": {},
"value": ["°", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651", "-122.341651"]
},
{
"type": "character",
"attributes": {},
"value": ["", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002", "002"]
},
{
"type": "character",
"attributes": {},
"value": ["", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water", "Fresh Water"]
},
{
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},
{
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},
{
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},
{
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},
{
"type": "character",
"attributes": {},
"value": ["", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
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{
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},
{
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{
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},
{
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"attributes": {},
"value": ["m", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
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"value": ["m", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
"type": "character",
"attributes": {},
"value": ["m(asl)", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
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},
{
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"value": ["m", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
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"attributes": {},
"value": ["m", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
"type": "character",
"attributes": {},
"value": ["m", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
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"value": ["", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
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},
{
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"attributes": {},
"value": ["m", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
"type": "character",
"attributes": {},
"value": ["°C", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
"type": "character",
"attributes": {},
"value": ["% mod.", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
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"attributes": {},
"value": ["", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
"type": "character",
"attributes": {},
"value": ["‰", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null]
},
{
"type": "character",
"attributes": {},
"value": ["ug/L", null, "10", "10", "10", "0.02", "0.02", "0.02", "0.02", "0.02", "0.02", "0.02", null, "0.02", "0.02", "0.005", "0.005", "0.005", "0.005", "0.005", "0.005", "0.005", "0.005", null, "0.005", "0.005", "0.005", "0.005", "0.005", "0.005", "0.005", "0.005", "0.01", "0.01", null, null, null, null, "10", null]
},
{
"type": "character",
"attributes": {},
"value": ["ug/L", null, "10", "10", "10", "0.02", "0.02", "0.02", "0.02", "0.02", "0.02", "0.02", null, "0.02", "0.02", "0.005", "0.005", "0.005", "0.005", "0.005", "0.005", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, "10", null]
},
{
"type": "character",
"attributes": {},
"value": ["ug/L", "20", "50", "50", "50", "0.3", "39.8", "0.3", "0.3", "0.3", "0.3", "0.3", null, "0.3", "0.3", "0.3", "0.6", "1.6", "1.1", "1", "0.4", "1.8", "0.7", "30", "1", "1.5", "1.02", "0.53", "1.34", "0.5", "0.5", "0.5", "1", "1", null, null, null, "100", "20", null]
},
{
"type": "character",
"attributes": {},
"value": ["ug/L", "70", "60", "60", "60", "5.4", "142", "1.5", "0.4", "0.3", "0.3", "0.3", null, "0.5", "0.7", "1.1", "1.4", "7.9", "1", "1.1", "0.6", null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, null, "100", "100", null]
},
{
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]
}
bcgov/rems2aquachem documentation built on Feb. 17, 2025, 5:41 a.m.
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internal data correct
Code
meq_conversion
Output
# A tibble: 18 x 4
param mass valency_state conversion
<chr> <dbl> <dbl> <dbl>
1 Al_diss 8.99 1 8.99
2 CO3 60.0 2 30.0
3 Ca 40.1 2 20.0
4 Cl 35.5 1 35.5
5 Cu_diss 63.5 2 31.8
6 F 19.0 1 19.0
7 Fe_diss 55.8 2 27.9
8 HCO3 61.0 1 61.0
9 K 39.1 1 39.1
10 Meas_Alk 100. 2 50.0
11 Mg 24.3 2 12.2
12 Mn_diss 54.9 2 27.5
13 NH4 14.0 1 14.0
14 NO2 14.0 1 14.0
15 NO3 14.0 1 14.0
16 Na 23.0 1 23.0
17 SO4 96.1 2 48.0
18 Zn_diss 65.4 2 32.7
water_type
{
"type": "list",
"attributes": {
"names": {
"type": "character",
"attributes": {},
"value": ["Sample_Date", "SampleID", "StationID", "Cl_meq", "SO4_meq", "HCO3_meq", "Meas_Alk_meq", "Ca_meq", "Mg_meq", "Na_meq", "K_meq", "charge_balance", "water_type"]
},
"row.names": {
"type": "integer",
"attributes": {},
"value": [1, 2, 3, 4]
},
"class": {
"type": "character",
"attributes": {},
"value": ["tbl_df", "tbl", "data.frame"]
}
},
"value": [
{
"type": "double",
"attributes": {
"class": {
"type": "character",
"attributes": {},
"value": ["Date"]
}
},
"value": [16500, 16489, 16849, 17051]
},
{
"type": "character",
"attributes": {},
"value": ["E292373-1", "E298873-1", "E298873-2", "E298873-3"]
},
{
"type": "character",
"attributes": {},
"value": ["426", "451", "451", "451"]
},
{
"type": "double",
"attributes": {},
"value": [0.05077144, 0.36668265, 0.23411277, 0.16952021]
},
{
"type": "double",
"attributes": {},
"value": [0.02519191, 0.06995438, 0.06662322, 0.07307735]
},
{
"type": "double",
"attributes": {},
"value": ["NA", 0.50970321, 0.50150862, 0.56870422]
},
{
"type": "double",
"attributes": {},
"value": [1.32285044, 0.50955719, 0.61146863, 0.69339744]
},
{
"type": "double",
"attributes": {},
"value": [0.92819003, 0.55391986, 0.4935376, 0.5139977]
},
{
"type": "double",
"attributes": {},
"value": [0.3488994, 0.14811767, 0.12919152, 0.1505863]
},
{
"type": "double",
"attributes": {},
"value": [0.17486038, 0.26272555, 0.22444766, 0.21531316]
},
{
"type": "double",
"attributes": {},
"value": [0.03401682, 0.03708601, 0.03529565, 0.03836484]
},
{
"type": "double",
"attributes": {},
"value": [3.4, 1, -4.2, -4.1]
},
{
"type": "character",
"attributes": {},
"value": ["Ca-Mg-HCO3*", "Ca-Na-HCO3-Cl", "Ca-Na-HCO3-Cl", "Ca-Na-HCO3"]
}
]
}
dominant_water_types()
{
"type": "list",
"attributes": {
"names": {
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