Files in bcm-uga/MatrixFactorizationR
Latent Factor Mixed Models

.gitignore
DESCRIPTION
LICENSE
Makefile
NAMESPACE
R/Dat.R R/LfmmDat.R R/RcppExports.R R/cross-validation.R R/example_data.R R/helpers.R R/hypothesis-testing.R R/io.R R/lassoLFMM.R R/lfmm.R R/matrix-factorizationR.R R/ridgeLFMM.R R/sampler.R R/skin_exposure.R README.md
_pkgdown.yml
data/example.data.rda
data/skin.exposure.rda
docs/LICENSE.html
docs/articles/index.html
docs/articles/lfmm.html
docs/articles/lfmm_files/figure-html/unnamed-chunk-10-1.png
docs/articles/lfmm_files/figure-html/unnamed-chunk-13-1.png
docs/articles/lfmm_files/figure-html/unnamed-chunk-17-1.png
docs/articles/lfmm_files/figure-html/unnamed-chunk-18-1.png
docs/articles/lfmm_files/figure-html/unnamed-chunk-22-1.png
docs/articles/lfmm_files/figure-html/unnamed-chunk-23-1.png
docs/articles/lfmm_files/figure-html/unnamed-chunk-4-1.png
docs/articles/lfmm_files/figure-html/unnamed-chunk-5-1.png
docs/articles/lfmm_files/figure-html/unnamed-chunk-9-1.png
docs/authors.html
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/reference/Dat.html
docs/reference/LfmmDat.html
docs/reference/SimulatedLfmmDat.html
docs/reference/compute_P.html
docs/reference/compute_pvalue_from_tscore.html
docs/reference/compute_pvalue_from_zscore.html
docs/reference/effect_size-1.png
docs/reference/effect_size-2.png
docs/reference/effect_size-3.png
docs/reference/effect_size.html
docs/reference/example.data.html
docs/reference/forward_test-1.png
docs/reference/forward_test-2.png
docs/reference/forward_test.html
docs/reference/hypothesis_testing_lm.html
docs/reference/index.html
docs/reference/left.out.kfold.html
docs/reference/lfmm.html
docs/reference/lfmm_CV.html
docs/reference/lfmm_fit.html
docs/reference/lfmm_fit_knowing_loadings.html
docs/reference/lfmm_fit_knowing_loadings.ridgeLFMM.html
docs/reference/lfmm_impute.html
docs/reference/lfmm_lasso-1.png
docs/reference/lfmm_lasso-2.png
docs/reference/lfmm_lasso.html
docs/reference/lfmm_residual_error2.html
docs/reference/lfmm_ridge-1.png
docs/reference/lfmm_ridge-2.png
docs/reference/lfmm_ridge.html
docs/reference/lfmm_ridge_CV-1.png
docs/reference/lfmm_ridge_CV-2.png
docs/reference/lfmm_ridge_CV.html
docs/reference/lfmm_sampler.html
docs/reference/lfmm_test-1.png
docs/reference/lfmm_test-2.png
docs/reference/lfmm_test.html
docs/reference/predict_lfmm-1.png
docs/reference/predict_lfmm-2.png
docs/reference/predict_lfmm.html
docs/reference/skin.exposure.html
hooks/post-receive.sh
inst/doc/lfmm.R inst/doc/lfmm.Rmd
inst/doc/lfmm.html
man/Dat.Rd man/LfmmDat.Rd man/SimulatedLfmmDat.Rd man/compute_P.Rd man/compute_pvalue_from_tscore.Rd man/compute_pvalue_from_zscore.Rd man/effect_size.Rd man/example.data.Rd man/forward_test.Rd man/hypothesis_testing_lm.Rd man/left.out.kfold.Rd man/lfmm.Rd man/lfmm_CV.Rd man/lfmm_fit.Rd man/lfmm_fit_knowing_loadings.Rd man/lfmm_fit_knowing_loadings.ridgeLFMM.Rd man/lfmm_impute.Rd man/lfmm_lasso.Rd man/lfmm_residual_error2.Rd man/lfmm_ridge.Rd man/lfmm_ridge_CV.Rd man/lfmm_sampler.Rd man/lfmm_test.Rd man/predict_lfmm.Rd man/skin.exposure.Rd
src/RcppExports.cpp
src/helpers.cpp
src/tess3.cpp
tests/testthat.R tests/testthat/test-dat.R tests/testthat/test-helpers.R tests/testthat/test-hypothesis-testing.R tests/testthat/test-lassoLFMM.R tests/testthat/test-lfmm.R tests/testthat/test-ridgeLFMM.R tests/testthat/test-sampler.R
tests/testthat/test-tess3.R
vignettes/lfmm.Rmd
bcm-uga/MatrixFactorizationR documentation built on Dec. 22, 2017, 2:50 a.m.