gsGenes: Return gene-set genes

In bedapub/ribiosGSEA: Gene-Set Enrichment Analysis Tools in Ribios

Return gene-set genes

Description

Return gene-set genes

Usage

gsGenes(object, ...)

## S4 method for signature 'AnnoBroadGseaResItem'
gsGenes(object)

## S4 method for signature 'AnnoBroadGseaRes'
gsGenes(object)

## S4 method for signature 'GmtList'
gsGenes(object)

Arguments

object	An object
...	Other parameters

Methods (by class)

• gsGenes(AnnoBroadGseaResItem): Get gene-set genes from a BroadGseaResItem object, returning a character string vector.

• gsGenes(AnnoBroadGseaRes): Get gene-set genes from an AnnoBroadGseaRes object, returning a list of character string vectors.

• gsGenes(GmtList): Get gene-set genes from a GmtList object, returning a list of character string vector. It uses the implementation in BioQC.

bedapub/ribiosGSEA documentation built on March 30, 2023, 3:26 p.m.