kendallW.eSet: Compute Kendall's W for an eSet object

In bedapub/ribiosGSEA: Gene-Set Enrichment Analysis Tools in Ribios

Compute Kendall's W for an eSet object

Description

Compute Kendall's W for an eSet object

Usage

## S3 method for class 'eSet'
kendallW(
  object,
  row.factor,
  summary = c("none", "mean", "median", "max.mean.sig", "max.var.sig"),
  na.rm = TRUE,
  alpha = 0.01,
  ...
)

Arguments

object	An eSet object
row.factor	A factor indicating groups of rows. In expression analysis, for instance, this can be GeneIDs indicating which probesets in rows belong to the same gene.
summary	Summary type, passed to kendallWmat
na.rm	Logical, whether NA values should be removed
alpha	Numeric, passed to kendallWmat
...	Not used

See Also

kendallWmat

bedapub/ribiosGSEA documentation built on March 30, 2023, 3:26 p.m.