pValue: Return P-values

In bedapub/ribiosGSEA: Gene-Set Enrichment Analysis Tools in Ribios

Return P-values

Description

Return P-values

Usage

pValue(object, ...)

## S4 method for signature 'FisherResult'
pValue(object)

## S4 method for signature 'FisherResultList'
pValue(object, ind, ...)

## S4 method for signature 'FisherResult'
fdrValue(object)

## S4 method for signature 'FisherResultList'
fdrValue(object, ind, ...)

Arguments

object	An object
...	Other parameters
ind	An integer or logical vector for subsetting

Methods (by class)

• pValue(FisherResult): Return the p-value from a FisherResult

• pValue(FisherResultList): Return the p-values from a FisherResultList. If ind is missing, all p-values are returned; otherwise, the subset indicated by ind is returned.

• fdrValue(FisherResult): Return the FDR-value from a FisherResult

• fdrValue(FisherResultList): Return the FDR-values from a FisherResultList. If ind is missing, all FDR-values are returned; otherwise, the subset indicated by ind is returned.

bedapub/ribiosGSEA documentation built on March 30, 2023, 3:26 p.m.