initialise_juveniles: Creates an initial data.table of juvenile agents. Since this...

In beeysian/cairnsmozzie: Agent-based model of Wolbachia release in a nice tidy package

Description

Creates an initial data.table of juvenile agents. Since this is an initial spread, some data is made up/dummy: for example, we don't know the ID of the parents. Latitude/Longitude of agents is randomly determined and added to the data.table after construction.

Usage

initialise_juveniles(Njuv, param, grid.df, boundaryDat)

Arguments

Njuv	The number of initial juvenile agents.

Value

A data.table of Njuv juvenile agents.

Data.table variables and initialisation

motherID:

ID of mother.

fatherID:

ID of father.

age:

Age in days. Initialised uniform randomly around what we would expect young adults to be.

stage:

Development stage of clutch. 1: egg, 2: larvae, 3: pupae.

infProb:

Probability of carrying Wolbachia. 0: no Wolbachia, -1: Cytoplasmic Incompatability, else infProb is nonzero.

lat:

Initial north/south or 'y' coordinate of agent. Should start with -16.

long:

Initial east/west of 'x' coordinate of agent. Should start with 145.

clutchSize:

Number of juveniles in the clutch.

enzyme:

Enzyme Kinetic Score of agents. Initialised uniform randomly. FIX

pDeath:

Probability of death.

beeysian/cairnsmozzie documentation built on Feb. 15, 2021, 12:12 a.m.