TreeToDend: Convert tree to dendrogram
In beiko-lab/evolCCM: R package for Community Coevolution Model
TreeToDend R Documentation
Convert tree to dendrogram
Description
Convert the non-ultrametric tree to a dendrogram for 'ProfilePlot()' to plot the profiles using
the 'chronos()' function from 'ape' package.
Usage
TreeToDend(phytree)
Arguments
tree
an object of class "phylo"
Value
a dendrogram as an input for 'ProfilePlot()' function
Examples
#library(ape)
# create a random 50-tip tree
t <- rtree(50)
plot(t)
d <- TreeToDend(t)
plot(d)
beiko-lab/evolCCM documentation built on Feb. 26, 2024, 5:21 p.m.
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| TreeToDend | R Documentation |
Convert tree to dendrogram
Description
Convert the non-ultrametric tree to a dendrogram for 'ProfilePlot()' to plot the profiles using the 'chronos()' function from 'ape' package.
Usage
TreeToDend(phytree)
Arguments
tree |
an object of class "phylo" |
Value
a dendrogram as an input for 'ProfilePlot()' function
Examples
#library(ape)
# create a random 50-tip tree
t <- rtree(50)
plot(t)
d <- TreeToDend(t)
plot(d)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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