Files in ben-mhamed/DEPLr
Simulation Depletion Model with R
.Rbuildignore
.Rhistory
.Rproj.user/36B3A57E/build_options
.Rproj.user/36B3A57E/ctx/ctx-18922/console_actions
.Rproj.user/36B3A57E/ctx/ctx-18922/environment
.Rproj.user/36B3A57E/ctx/ctx-18922/environment_vars
.Rproj.user/36B3A57E/ctx/ctx-18922/history
.Rproj.user/36B3A57E/ctx/ctx-18922/libpaths
.Rproj.user/36B3A57E/ctx/ctx-18922/options
.Rproj.user/36B3A57E/ctx/ctx-18922/plots_dir/INDEX
.Rproj.user/36B3A57E/ctx/ctx-18922/plots_dir/empty.png
.Rproj.user/36B3A57E/ctx/ctx-18922/search_path/package_paths
.Rproj.user/36B3A57E/ctx/ctx-18922/search_path/search_path_elements
.Rproj.user/36B3A57E/ctx/ctx-18922/settings
.Rproj.user/36B3A57E/pcs/debug-breakpoints.pper
.Rproj.user/36B3A57E/pcs/files-pane.pper
.Rproj.user/36B3A57E/pcs/packages-pane.pper
.Rproj.user/36B3A57E/pcs/source-pane.pper
.Rproj.user/36B3A57E/pcs/windowlayoutstate.pper
.Rproj.user/36B3A57E/pcs/workbench-pane.pper
.Rproj.user/36B3A57E/persistent-state
.Rproj.user/36B3A57E/sdb/prop/1872C45
.Rproj.user/36B3A57E/sdb/prop/1C97B522
.Rproj.user/36B3A57E/sdb/prop/1FDE0FA7
.Rproj.user/36B3A57E/sdb/prop/20F54C6D
.Rproj.user/36B3A57E/sdb/prop/2600F28B
.Rproj.user/36B3A57E/sdb/prop/29116D82
.Rproj.user/36B3A57E/sdb/prop/2D09B046
.Rproj.user/36B3A57E/sdb/prop/2DECB9AE
.Rproj.user/36B3A57E/sdb/prop/30A2D0A6
.Rproj.user/36B3A57E/sdb/prop/352F43F8
.Rproj.user/36B3A57E/sdb/prop/3576DB6F
.Rproj.user/36B3A57E/sdb/prop/36C35A1C
.Rproj.user/36B3A57E/sdb/prop/399B18E9
.Rproj.user/36B3A57E/sdb/prop/3A88F88B
.Rproj.user/36B3A57E/sdb/prop/3A961C0B
.Rproj.user/36B3A57E/sdb/prop/3B37002E
.Rproj.user/36B3A57E/sdb/prop/3E92BFEB
.Rproj.user/36B3A57E/sdb/prop/405EA841
.Rproj.user/36B3A57E/sdb/prop/41AAE558
.Rproj.user/36B3A57E/sdb/prop/438ED171
.Rproj.user/36B3A57E/sdb/prop/4703A6D0
.Rproj.user/36B3A57E/sdb/prop/47BA7C64
.Rproj.user/36B3A57E/sdb/prop/481358BC
.Rproj.user/36B3A57E/sdb/prop/485DCC8B
.Rproj.user/36B3A57E/sdb/prop/4B02263A
.Rproj.user/36B3A57E/sdb/prop/52242C52
.Rproj.user/36B3A57E/sdb/prop/55BDBAE8
.Rproj.user/36B3A57E/sdb/prop/5B7D7E9A
.Rproj.user/36B3A57E/sdb/prop/5C2D0DAB
.Rproj.user/36B3A57E/sdb/prop/5ED30F4F
.Rproj.user/36B3A57E/sdb/prop/624C90DC
.Rproj.user/36B3A57E/sdb/prop/62B27D88
.Rproj.user/36B3A57E/sdb/prop/6396EF7D
.Rproj.user/36B3A57E/sdb/prop/66AFBAF8
.Rproj.user/36B3A57E/sdb/prop/6DE52968
.Rproj.user/36B3A57E/sdb/prop/6FA93519
.Rproj.user/36B3A57E/sdb/prop/739DEC73
.Rproj.user/36B3A57E/sdb/prop/7598FD32
.Rproj.user/36B3A57E/sdb/prop/84E03D93
.Rproj.user/36B3A57E/sdb/prop/896C71E
.Rproj.user/36B3A57E/sdb/prop/8C249133
.Rproj.user/36B3A57E/sdb/prop/98C9E212
.Rproj.user/36B3A57E/sdb/prop/9A5A3D75
.Rproj.user/36B3A57E/sdb/prop/9A6D1294
.Rproj.user/36B3A57E/sdb/prop/9B72CBEC
.Rproj.user/36B3A57E/sdb/prop/9C4A817
.Rproj.user/36B3A57E/sdb/prop/A397DBDA
.Rproj.user/36B3A57E/sdb/prop/A3AE5456
.Rproj.user/36B3A57E/sdb/prop/A535C369
.Rproj.user/36B3A57E/sdb/prop/A9508165
.Rproj.user/36B3A57E/sdb/prop/AD26A6F0
.Rproj.user/36B3A57E/sdb/prop/ADF3F7A0
.Rproj.user/36B3A57E/sdb/prop/AE1FF1ED
.Rproj.user/36B3A57E/sdb/prop/B061507D
.Rproj.user/36B3A57E/sdb/prop/B6606993
.Rproj.user/36B3A57E/sdb/prop/C05064E4
.Rproj.user/36B3A57E/sdb/prop/C0F3E821
.Rproj.user/36B3A57E/sdb/prop/C2751B5F
.Rproj.user/36B3A57E/sdb/prop/CF1CD89
.Rproj.user/36B3A57E/sdb/prop/D0D01FC3
.Rproj.user/36B3A57E/sdb/prop/D468562D
.Rproj.user/36B3A57E/sdb/prop/D4EC613B
.Rproj.user/36B3A57E/sdb/prop/D4FD7A68
.Rproj.user/36B3A57E/sdb/prop/D885C5BC
.Rproj.user/36B3A57E/sdb/prop/DA5755D1
.Rproj.user/36B3A57E/sdb/prop/DD1FC7FF
.Rproj.user/36B3A57E/sdb/prop/E054FAC
.Rproj.user/36B3A57E/sdb/prop/EA56C766
.Rproj.user/36B3A57E/sdb/prop/ED236950
.Rproj.user/36B3A57E/sdb/prop/EF22D7C0
.Rproj.user/36B3A57E/sdb/prop/F70DC3BC
.Rproj.user/36B3A57E/sdb/prop/FB27532C
.Rproj.user/36B3A57E/sdb/prop/FB5565F3
.Rproj.user/36B3A57E/sdb/prop/FD9A5A97
.Rproj.user/36B3A57E/sdb/prop/INDEX
.gitignore
DEPLr.Rproj
DEPLr.mm
DESCRIPTION
Jags/model_senegalV7.R
Jags/model_senegal_V7.bugs
NAMESPACE
R/DEPL-functions.R
R/DEPL-generics.R
R/DEPLFleet-class.R
R/DEPLFleet-method.R
R/DEPLFleet.R
R/DEPLPar-class.R
R/DEPLPar-method.R
R/DEPLPar.R
R/DEPLSim-class.R
R/DEPLSim-method.R
R/DEPLSim.R
R/DEPLZone-class.R
R/DEPLZone-method.R
R/DEPLZone.R
R/read.sim.R
R/run.R
Read-and-delete-me
input/sim1.inp
input/sim1.inp~
input/sim2.inp~
man/DEPLFleet-class.Rd
man/DEPLFleet.Rd
man/DEPLPar-class.Rd
man/DEPLPar.Rd
man/DEPLSim-class.Rd
man/DEPLSim.Rd
man/DEPLZone-class.Rd
man/DEPLZone.Rd
man/LW.Rd
man/age0.Rd
man/as.data.frame-DEPLFleet-method.Rd
man/as.data.frame-DEPLPar-method.Rd
man/catch.n-DEPLSim-method.Rd
man/catch.n.Rd
man/catch.wt-DEPLSim-method.Rd
man/catch.wt.Rd
man/catchability-DEPLFleet-method.Rd
man/catchability-set-DEPLFleet-method.Rd
man/catchability-set.Rd
man/catchability.Rd
man/controle-DEPLSim-method.Rd
man/controle.Rd
man/describe-DEPLZone-method.Rd
man/describe.Rd
man/dim-DEPLFleet-method.Rd
man/dim-DEPLZone-method.Rd
man/fleet-DEPLSim-method.Rd
man/fleet-DEPLZone-method.Rd
man/fleet.Rd
man/growth.Rd
man/index-DEPLSim-method.Rd
man/index.Rd
man/names-DEPLFleet-method.Rd
man/names-DEPLPar-method.Rd
man/names-DEPLZone-method.Rd
man/names-set-DEPLFleet-method.Rd
man/names-set-DEPLZone-method.Rd
man/plot-DEPLZone-method.Rd
man/progressBar.Rd
man/quant2.5.Rd
man/quant97.5.Rd
man/read.sim.Rd
man/run-DEPLSim-method.Rd
man/show-DEPLFleet-method.Rd
man/show-DEPLPar-method.Rd
man/stock.n-DEPLSim-method.Rd
man/stock.n.Rd
man/stock.wt-DEPLSim-method.Rd
man/stock.wt.Rd
man/summary-DEPLSim-method.Rd
man/zones-DEPLSim-method.Rd
man/zones.Rd
vignettes/DEPLr.html
vignettes/DEPLr_cache/html/__packages
vignettes/DEPLr_cache/html/unnamed-chunk-7_09d6b49bbb36ba2fce01c0f7aeec0d71.RData
vignettes/DEPLr_cache/html/unnamed-chunk-7_09d6b49bbb36ba2fce01c0f7aeec0d71.rdb
vignettes/DEPLr_cache/html/unnamed-chunk-7_09d6b49bbb36ba2fce01c0f7aeec0d71.rdx
vignettes/DEPLr_files/figure-html/unnamed-chunk-10-1.png
vignettes/DEPLr_files/figure-html/unnamed-chunk-11-1.png
vignettes/DEPLr_files/figure-html/unnamed-chunk-12-1.png
vignettes/DEPLr_files/figure-html/unnamed-chunk-13-1.png
vignettes/DEPLr_files/figure-html/unnamed-chunk-13-2.png
vignettes/DEPLr_files/figure-html/unnamed-chunk-14-1.png
vignettes/DEPLr_files/figure-html/unnamed-chunk-14-2.png
vignettes/DEPLr_files/figure-html/unnamed-chunk-14-3.png
vignettes/DEPLr_files/figure-html/unnamed-chunk-4-1.png
vignettes/cache/__packages
vignettes/cache/unnamed-chunk-7_95c2fb1b7100468043448863b973ec8e.RData
vignettes/cache/unnamed-chunk-7_95c2fb1b7100468043448863b973ec8e.rdb
vignettes/cache/unnamed-chunk-7_95c2fb1b7100468043448863b973ec8e.rdx
vignettes/out/unnamed-chunk-10-1.png
vignettes/out/unnamed-chunk-10-2.png
vignettes/out/unnamed-chunk-10-3.png
vignettes/out/unnamed-chunk-11-1.png
vignettes/out/unnamed-chunk-11-2.png
vignettes/out/unnamed-chunk-12-1.png
vignettes/out/unnamed-chunk-12-2.png
vignettes/out/unnamed-chunk-4-1.png
vignettes/out/unnamed-chunk-4-2.png
vignettes/out/unnamed-chunk-5-1.png
vignettes/out/unnamed-chunk-5-2.png
vignettes/out/unnamed-chunk-6-1.png
vignettes/out/unnamed-chunk-6-2.png
vignettes/out/unnamed-chunk-7-1.png
vignettes/out/unnamed-chunk-7-2.png
vignettes/out/unnamed-chunk-8-1.png
vignettes/out/unnamed-chunk-8-2.png
vignettes/out/unnamed-chunk-9-1.png
vignettes/out/unnamed-chunk-9-2.png
