A generic annotation package builder for Affymetrix SNP
arrays. This is a simplified version of the annotation package and
crlmm will *not* work for them.
Objects can be created by calls of the form
new("AffySNPPDInfoPkgSeed2", cdfFile, csvAnnoFile, csvSeqFile, ...).
Logical flag for experimental build of annotation packages for Axiom arrays.
CDF file for the design.
Affymetrix CSV Annotation file.
Affymetrix Probe Sequence file.
Name of the chip or platform
The genome build this platform is based upon.
organism for chip.
species for chip.
A character vector giving the version number of the package.
The license of the package
Author of the package
An email address to use in the Maintainer field
Character data for the biocViews field of the DESCRIPTION file
signature(object = "AffySNPPDInfoPkgSeed2"): ...
This is a simplified annotation package. CRLMM won't work for these objects.
The user may need to rename the columns or even add column names to the annotation and sequence files. In case problems are found, column names are suggested.
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