README.md

In benjamincrary/OTLhab: What the Package Does (One Line, Title Case)

OTLhab

The goal of OTLhab is to estimate oxythermal habitat in lakes using temperature and dissolved oxygen profiling data.

Installation (not yet live)

devtools::install_github("benjamincrary/OTLhab")

Example

## basic example code

#Load example data
data(lco)

#Set criteria for DO minimum and Temperature maximum
myCriteria <- setCriteria(6,66)

#Define vertical OTL bands. Interpolate over 0.1 feet. 
Bands <- interpolateOTL(lco, myCriteria, 0.1)

#Plot OTL bands at Station "LCO2" for 2016 season
LCO2_2016 <- plotSingle(Bands, "LCO2", 2016, myCriteria)

#Save plot 
LCO2_2016 + ggsave("pathtofile/output.pdf") 

#Plot OTL bands for multiple stations and multiple seasons
majorbasins <- plotMultiple(plotMultiple(Bands, c("LCO2", "LCO3", "LCO4"), c(2015,2016,2017,2018),myCriteria))

benjamincrary/OTLhab documentation built on Feb. 3, 2020, 12:10 a.m.