cytofin_read_panel_info: Read in a cytofin reference panel information

In bennyyclo/Cytofin: Integrate CyTOF Datasets From Heterogeneous Sources

Description

This function reads cytofin reference panel information from a connection that points to a .csv or a .xlsx file

Usage

cytofin_read_panel_info(panel_path)

Arguments

panel_path

A file path leading to an .xlsx or .csv file containing a table of standardized antigen panel information. Columns should include desc, range, metal_pattern, antigen_pattern, Lineage, Functional, and General. TO DO: Change the names of these columns to more descriptive names and make sure that they are all actually needed. See the vignette for details: vignette("help", package = "cytofin")

Value

A data.frame containing the reference panel information in the file stored at panel_path.

Examples

## Not run: 
my_path <- file.path("~", "foo", "bar", "panel.csv")
my_metadata <- cytofin:::cytofin_read_panel_info(my_path)

## End(Not run)

bennyyclo/Cytofin documentation built on July 18, 2021, 8:16 a.m.