rosetta: Translate Parameter Names

In bergsmat/nonmemica: Create and Evaluate NONMEM Models in a Project Context

Translate Parameter Names

Description

Translate among various idioms for expressing parameter names

Examples

library(magrittr)
options(project = system.file('project/model',package='nonmemica'))

# we generate some nonmem parameter names in nonmem format
1001 %>% nms_nonmem -> nonmem
nonmem

# from these we generate canonical and pmxTools equivalents
canonical <- nms_canonical(nonmem)
pmxtools <- nms_pmx(nonmem)
canonical
pmxtools

# We demonstrate equivalence
stopifnot(identical(nonmem, nms_nonmem(canonical)))
stopifnot(identical(nonmem, nms_nonmem(pmxtools)))
stopifnot(identical(canonical, nms_canonical(nonmem)))
stopifnot(identical(canonical, nms_canonical(pmxtools)))
stopifnot(identical(pmxtools, nms_pmx(nonmem)))
stopifnot(identical(pmxtools, nms_pmx(canonical)))

# on-the-fly conversions
nonmem %>% class
nonmem %>% nms_pmx
nonmem %>% nms_canonical
nonmem %>% nms_canonical %>% nms_pmx
nonmem %>% nms_canonical %>% nms_pmx %>% nms_nonmem

# comparison
data.frame(
 can = canonical,
 non = nonmem,
 pmx = pmxtools,
 psn = 1001 %>% nms_psn
)

bergsmat/nonmemica documentation built on Sept. 15, 2023, 9:22 a.m.