colour_on_top | Reorder paths so selected (colored) paths are on top |
create_ipath_data | Format input data to plot with ipath |
find_layer_locs | Get indices for the start of each layer in svg text |
make_ipath_ggplot | make a ipath ggplot |
make_svg_df | Convert a svg path specification to data.frame compatible... |
make_svg_df_straight | Convert a svg stright line path specification to data.frame... |
map_values_to_colors | Map a vector of values to hex colors |
map_values_to_range | Map a vector of values to a prespecified range |
print_ipath_pdf | Write an iPath3 metabolic pathways map to pdf |
recolor_textbox | Change color of boxes surrounding major pathway names |
svg_to_table | Convert svg data to tables for ggplot |
to_parameters | Format ipath data.frame as parameters |
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