fitGenewiseBatchPriorParams: NOTE previous name: est_varofind

In beyondpie/mssc: Multiple-sample differential analysis for single-cell RNA sequencing data

Description

NOTE previous name: est_varofind

Usage

fitGenewiseBatchPriorParams(muind, min_varofind = 0.25, min_tau2 = 0.25)

Arguments

muind	matrix, ngene by nind
min_varofind	scalar, lower bound of estimated variance of individuals.
min_tau2	scalar, lower bound of estimated tau2.

Value

list of two elements

• est_varofind: matrix, nind by 4

  • mean, variance, alpha and beta (inv-gamma dist as the prior of the variance)

• est_tau2: vector of 3 elements

  • tau2, tau2_alpha, tau2_beta (assume muinds follow a N(0.0, tau), taus is std.)

beyondpie/mssc documentation built on Jan. 8, 2022, 1:30 p.m.