bicciatolab/PoPsicleR: Pipeline of Preprocessing for Single Cell Experiment
Here we present popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and detailed analysis of single cell RNA-seq data. In its workflow, popsicleR integrates all the pivotal steps necessary to assess sample quality, apply data tailored filters and perform doublets calculation and annotation analysis.
Getting started
Browse package contents
Package details |
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| Author | Francesco Grandi, Jimmy Caroli, Oriana Romano, Matteo Marchionni, Mattia Forcato and Silvio Bicciato |
| Maintainer | |
| License | GPL3 |
| Version | 0.2.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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