API for bicciatolab/PoPsicleR
Pipeline of Preprocessing for Single Cell Experiment
| Global functions | |
|---|---|
| .onAttach | Source code |
| ApplyRegression | Man page Source code |
| CalculateCluster | Man page Source code |
| CalculateDoublets | Man page Source code |
| DTP | Source code |
| FTP | Source code |
| FilterPlots | Man page Source code |
| MakeAnnotation | Man page Source code |
| Normalize | Man page Source code |
| PrePlots | Man page Source code |
| SR_plots | Source code |
| VLN | Source code |
| algo_plot_clusters | Source code |
| algo_plot_features | Source code |
| annotation_plot | Source code |
| calculateDoubletScores | Source code |
| callDoublets | Source code |
| firstup | Source code |
| four_plots | Source code |
| get_vscores | Source code |
| histogramDoubletScores | Source code |
| pipeline_get_filter | Source code |
| pipeline_log_transform | Source code |
| pipeline_normalize | Source code |
| pipeline_pca | Source code |
| pipeline_zscore | Source code |
| plotGene | Source code |
| popsicleR | Man page Man page |
| runningquantile | Source code |
| scrubDoublets | Source code |
| scrubDoublets_resetThreshold | Source code |
| simulateDoublets | Source code |
| subsampleCounts | Source code |
